Rosa chinensis (China rose): 112176609
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Entry
112176609 CDS
T06020
Name
(RefSeq) protein FIZZY-RELATED 2
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112176609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112176609
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
112176609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Peptidase_M10_C
KNTC1_N
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
112176609
NCBI-ProteinID:
XP_024170389
LinkDB
All DBs
Position
7:complement(17864384..17868882)
Genome browser
AA seq
485 aa
AA seq
DB search
MDDPMLSSSSSSTQLNQPPPTLPRTPMAVQPETPARHIERMLNVNHHHRSPSRTIYSDRF
IPSRSGSNFGLFDIKSPTNSQCDETSSAYTTLLRAALFGPDTAGVIPPATPDRRGLMNPP
NQNIFRFKSETRRSMHSLLPFGFDDDVVTGVHHSPVKTPRKVPRSPYKVLDAPALQDDFY
LNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGTDDSVCSVGWAQRGTHLAVGTGN
GKVQIWDASRCKRVRTMEGHRLRIGALAWSSSMLSSGSRDKSILQRDIRAQEDFVSKLSG
HKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLL
ASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYP
TMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTGSEIGASCLG
RTIIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctatgctatcttcttcttcttcttctacgcagctcaatcagccgccgccg
acgcttccgcgtacccctatggcggtccagccggagacgccggcccggcacatcgagcga
atgctgaacgtcaaccaccaccaccgatcgccgtcgcggaccatctactccgataggttc
atacccagcagatccggctctaactttggtttgttcgacatcaaatcgccgacgaattct
cagtgcgacgagacctccagcgcctacaccacgctcctacgcgccgccctcttcggcccc
gacaccgccggcgtgattcctccggcgacccccgatcggcgggggctgatgaacccgccg
aaccagaatatattccggttcaagagcgagacgcggcggtccatgcactcgctgctgccg
tttgggtttgacgatgacgtggtcaccggagttcatcatagtccggtgaagacccccagg
aaggtccccaggtcgccgtataaggttttggatgcaccggctttgcaagacgatttctat
ctgaatctggtggattggtcttcgcataatgtattggctgtggggttggggaactgtgtt
tatttgtggaatgcttgtagtagtaaggtaactaagttatgcgatttggggactgatgat
agtgtctgttcggttggctgggcgcagcggggaactcatcttgctgtgggaactggcaat
gggaaagtccaaatttgggatgcatctcgctgtaagagggtaagaactatggagggccat
cgtctacgtattggggcattggcctggagttcatccatgttgtcttctggtagccgtgac
aagagtattcttcaacgggatatacgcgctcaggaagatttcgttagcaaactttctgga
cataagtcagaggtttgtggactgaagtggtcttatgacaaccgtgagttggcatcaggc
gggaatgataatagactttttgtttggaatcaacattcaactcaacccgtgctgaaatac
tgtgagcatactgctgccgtgaaagctattgcatggtccccccatcttcatggacttctt
gcatctgggggaggaactgcagaccgatgtatccgtttctggaatacaaccactaactct
cacttgagctgcatggacactggaagtcaggtttgcaatcttgtgtggtccaaaaatgtc
aatgagctcgtcagcacgcacgggtactcccaaaatcagataatagtttggagatatcct
acgatgtccaagctggcaactctcacgggccatacatatagagttctttatcttgccatc
tcacctgacggacagacaattgtcacaggagcaggagatgaaacacttaggttttggaat
gtgtttccttcccctaaatctcagaatacgggaagtgaaatcggagcatcatgtctaggc
agaaccatcatcaggtga
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