Rosa chinensis (China rose): 112176631
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Entry
112176631 CDS
T06020
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112176631
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rcn00535
]
112176631
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112176631
Meiosis-specific proteins
Cohesin complex and associated proteins
112176631
Proteoglycans [BR:
rcn00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
112176631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
Myosin_tail_1
BAR_4
DEAD
APG6_N
DUF1818
Motif
Other DBs
NCBI-GeneID:
112176631
NCBI-ProteinID:
XP_024170427
LinkDB
All DBs
Position
7:complement(6536090..6549366)
Genome browser
AA seq
1202 aa
AA seq
DB search
MHIKQIIIEGFKSYREQVATEPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFQNLRSDD
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRQESLKIMQ
DTGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARQRLA
EVEDDRNKVSETSTRMYNSVLDAHEKSKDLDKALKDLTKELQALNKEKEAVEKRRTDAIK
KHTELELDVKDLQEKISGNIRAKEDAVKQLQSLQKEIQDSMDELENISPLYENQVMREKE
ITKGIMEREKQLSILYQKQGRATQFPSKAARDKWLQKEIDDLERVLSSNLAQENKLQDEI
KRLNAELHERGTYIESRRNEITNKESLISQSREGFSHHKAERDKMQDERKTLWRKETELS
AEIDKLRTEVEKAEKSLDHSTPGDVRRGLNSVRKICREYNIPGVFGPIIELLDCEEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSLKGGRVTFIPLNRVRAPRVTYPQNSDVVPL
LKRLKFLPKYTAAFAQVFARTVVCRDLDVATKVARSDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNLIRQNTKSISLKEEELEKIRNMLEKIDEEITKLVTEQQKIDAERVHVKS
ELEQLKQDIANANKQQNLISKALGNKEKSLADVRVQIDQLRASMAMKHAEMGTDLIDHLT
PEEKDLLSRLNPEIADLKEKLITCKADRTETEARKAELETNLTTNLKRRKQELEAIISSV
ETDNLHGEDEIKIQELNDARLLVEDATEQLRRVSESIDGQSRQLRKTKDEKTKLKNLEDN
YERTLQDEAKQLEQLLSKRNMYLAKQEEYSKKIRELGALSSDAFETYKRRNIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIAELISVLDQRKDESIE
RTFKGVARNFREVFSELVQGGHGHLLMVKRKDGNHADDDLDEDDGPGETDRSEKYIGVKV
KVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQQCDPAPFYLFDEIDAALDPQYRTAVGN
MIRRLADTETTQFITTTFRQELVKVSDKIYGVTHSNRVSRVNVISKEEALNFIDQDQSHN
AN
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaagcagattataattgaaggatttaagagctacagagaacaggttgctact
gagccattcagtccaaaaatcaattgcgttgttggtgctaatgggtccggaaagacaaac
tttttccatgcaattcggtttgtactaagtgaccttttccaaaaccttcgaagcgacgat
cggcatgctctactccatgaaggtgcagggcaccaagtcttatctgcatttgtggagatt
gtcttcgataactctgacaatcgaataccggttgataaggaggaagtgcggttgcgaagg
acaattggtttgaagaaggatgagtatttcttggatggaaagcacatcacgaaaactgag
gttatgaatttactggaaagtgctgggttctctcgctccaatccatattatgttgtgcag
caaggaaagatagcatccttgacactgatgaaagattctgagcgactggatttacttaag
gaaatcggtggcactcgagtgtatgaggagagacgtcaagaaagtttgaaaatcatgcag
gacactggtaacaaaagaaagcagataattcaagttgttcagtacttggatgagagatta
aaggaactggacgaagagaaagaggaactcagaaagtatcagcagcttgacaagcagcga
aaatctctggaatacactatatatgacaaggaacttcaggatgctcgccaaaggctggca
gaggtagaagatgatcggaataaggtttctgaaacatcgacgaggatgtataatagtgtg
ctggatgcccatgaaaagtccaaggacttggataaggctttgaaagatttgacaaaagag
ctacaagctttaaataaagagaaagaagcagtggaaaaacgaagaacagacgcgataaag
aaacacacagagcttgagcttgatgtcaaagatctacaggagaagatatctggaaacatc
cgagccaaagaagatgctgtgaaacaactacagagtctgcagaaagagattcaggattca
atggatgagcttgagaatataagtcctctgtatgagaatcaagtcatgagggaaaaggag
ataacaaagggaataatggagcgtgagaagcagcttagcatactttatcaaaaacaaggt
cgtgcgacccagtttccaagtaaagctgctcgtgacaaatggcttcaaaaggaaattgat
gatcttgaacgagttctttcgtcaaatttggcacaggagaacaagcttcaggatgaaatt
aaacgtcttaatgctgaattgcacgagcggggtacttacattgaatctcgaagaaatgaa
attactaacaaggaatctctcatctctcagtcacgtgaagggttcagtcatcataaagca
gagagggacaagatgcaggatgagcgcaagaccctatggaggaaagaaacagaactttct
gctgaaattgataaactgagaacagaagttgagaaggcagagaagagccttgatcattca
actcctggtgatgtgaggagagggctaaattctgttcgtaagatctgcagagagtataat
attcctggggtatttggtcctattattgagttgcttgattgtgaggaaaagttttttaca
gcagtggaagttactgctgggaacagcttatttcatgttgtggttgaaaatgatgaaata
tcaactcagataatcaggcaccttaattcactgaaaggtgggcgtgttacttttatcccc
ctgaatagggtgagggctccaagggtaacttatccacaaaactcagacgtggttcctttg
ttgaagaggttaaagtttcttccaaagtacactgctgcatttgctcaggtatttgctaga
acagttgtttgtcgagatctggatgtggccacaaaggttgctcgtagcgatggtctagat
tgcatcactttagaaggagatcaagtcagcaagaagggtgggatgacgggaggattttat
gatcacagacgctcaaagttgaagttcatgaatctaatccgacagaatacaaaatctatc
agcttgaaagaagaagaacttgagaaaatcagaaatatgcttgaaaagatagacgaggaa
attacaaaacttgtaactgagcagcagaaaattgatgctgagcgagtccatgtcaaatca
gaactggaacagcttaagcaggacattgcgaatgctaataagcagcaaaatttaatttct
aaagcacttgggaataaggaaaaatcacttgctgatgtgcgggttcaaattgatcagctt
agagctagtatggccatgaagcatgctgaaatgggcaccgatctcattgatcatttgact
ccagaggagaaggatcttctctcaagattgaaccctgaaatagcagatctgaaagagaaa
cttattacatgcaaggcggatcgaactgagactgaagcaagaaaggcagagcttgaaact
aatttaactacgaaccttaagaggcggaagcaagaactagaggcaataatatcttctgtg
gaaactgataatttgcatggtgaagatgaaataaagattcaggaactgaatgatgctaga
ttattggttgaagatgcaacagagcagctcagaagagtttctgaaagtattgatggtcag
tcgaggcaattgaggaaaaccaaggatgaaaagactaagttgaagaacttggaagacaac
tatgagaggacacttcaggatgaagccaaacagctggagcagctactgagtaaaagaaat
atgtatcttgctaaacaagaagagtactcaaagaaaatcagggaattgggtgcattgtca
tcggatgcttttgaaacgtataagcgaaggaacatcaaagaactacataaaatgctgcac
agatgcaatgagcaactgcaacagtttagtcatgtcaacaagaaagcacttgaccagtat
gtaaattttacagaacaacgtgaagaactccagagaaggcaagctgaactggatgcaggt
gatgagaaaattgcagaacttatatctgtcttagatcaaaggaaggatgaatcaatagaa
cgcacttttaaaggtgttgctaggaactttcgagaagttttctctgaacttgtgcaaggt
ggccatggtcaccttctcatggtgaaaagaaaggatggtaaccatgctgacgatgatctg
gatgaggatgatggaccaggggaaacagatagatctgagaaatatattggtgtgaaagta
aaggtttcttttaccgggcaaggagagactcagtccatgaagcagttgtctgggggtcag
aaaactgttgttgcattgacgcttatctttgcaatacagcaatgtgatcctgctcctttc
tatctttttgatgaaattgatgcagcgctggatcctcagtacaggactgctgttggaaat
atgatccgacgcctggcagataccgaaactactcaatttataactacaacattccgacaa
gagcttgtgaaagtttctgacaagatatatggtgttacacattcaaacagggtgagccgt
gtcaacgttatctcaaaggaagaagcattgaactttattgatcaagaccagtcacacaat
gctaactaa
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integrated database retrieval system
