Rosa chinensis (China rose): 112176662
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Entry
112176662 CDS
T06020
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112176662
03036 Chromosome and associated proteins [BR:
rcn03036
]
112176662
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112176662
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112176662
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112176662
microRNA pathway
RISC loading complex
112176662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112176662
NCBI-ProteinID:
XP_024170479
LinkDB
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Position
7:complement(407180..413996)
Genome browser
AA seq
1080 aa
AA seq
DB search
MVRKRRTELPSGSESSESGSQRPAAPPAQQQQGAGGPQGGRGSPPQQQGGGGYPQQQGGR
GAPPQQQGGGYQGGRGSTPQGGRGGYGGGRGGYPTPQQQYGGPPEYQGRGRGGPPQQGGR
GGYSGGRGGPSPGGPSRSPVSELHQATPVPYQAGITPQPAAYQASSSSHPPEPSEVAEQF
QQVSIQQEEAPSQAIQHVPVSSKGMRFPLRPGKGKTGTRCTVKANHFFAELPDKDLHQYD
VTITPEVTSRGVNRAVMSQLVKTYKDSHLSSRLPAYDGRKSLYTAGPLPFQSKEFKITLL
DDEEGQAGQARRERDFRVVIKFAARADLHHLGLFLQGRIADAPQEALQVLDIVLRELPTS
RYCPVGRSFYDPGLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIE
FVTQLLNRDVQARPLSDSDRVKIKKALRGVRVEVTHRGNMRRKYRISGLTSQATRELTFP
VDERGTMKSVVEYFHETYGFAIQHPYWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNE
RQITALLKVTCQRPQERERDIMQTVRHNAYAEDPYAQEFGIKISENLAQVEARILPPPWL
KYHDTGREKDCLPQVGQWNMMNKKMVNGGKVTNWICINFSRNVQDSVAKGFCYELAQMCH
ISGMAFNPEPVLPPVSARPDQVEKVLKTRYHDAMTKIPGKELDLLVVILPDNNGSLYGDL
KRICETDLGLVSQCCLTKHVFRMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDR
PTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQD
PVKGTMSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
PNYQPPVTFVVVQKRHHTRLFADNHRDRNAIDRSGNILPGTVVDSKICHPTEFDFYLCSH
AGIQGTSRPAHYHVLWDENKFTADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
RFYMEPETSDSGSMSSGAHGRGGGMAGAGGGRSTRAPGPNAAVRPLPALKENVKKVMFYC
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgagcttcctagcggaagtgaaagctctgagtctggttcc
cagcgtcccgctgctccaccagcacaacaacaacaaggtgccggaggtccccaaggggga
aggggatctccgcctcaacaacagggtggagggggttacccacaacaacaaggtggaagg
ggagctccgcctcaacaacagggtggaggttaccaaggtggaagaggatctactccacag
ggagggcgtgggggttatggtggtggccgtggaggctatccaacgccacaacagcagtat
ggcggccctcctgaatatcaaggcagaggcaggggagggcctcctcagcaaggaggccga
ggagggtacagtggcggtcgtggaggaccttctcctggtggcccatccagatcaccagtt
tccgagctgcaccaagcaaccccagttccttatcaagctggaatcacccctcagcctgct
gcttatcaagcaagttcatcatctcatccacctgagccttcagaagtggcagagcagttt
cagcaggtttccatccagcaagaggaagctcctagtcaggccattcaacacgttccagtc
tctagcaagggtatgaggttccctcttcgccctggtaagggtaagactggcacaaggtgt
acagtcaaggcaaatcatttctttgctgaattaccagacaaggatctgcaccaatatgat
gtaactattacaccagaagtcacatcacggggtgtgaaccgtgctgtgatgtctcagcta
gtgaaaacctacaaggactcccatctttcaagccggcttcctgcttatgatggacggaag
agcctgtatactgctggacctcttcctttccagtcaaaggagttcaaaatcactcttctg
gatgatgaggagggacaggctggacaagcccggcgagagagagatttcagagttgtgatt
aaatttgctgctcgtgctgacctgcaccatttaggtctctttttgcaagggaggatagct
gatgcaccccaggaggcccttcaggttcttgacattgttctaagggagttgcctacttct
aggtactgtcctgtggggcgttcattttacgaccctggcttggggagaagacaaccactt
ggtgagggtttggaaagctggcgtggtttctaccagagtattcgtccaactcaaatgggt
ctatctttaaatattgatatgtcctcgacagcttttattgagccattgccagttattgag
tttgtaacccagctactgaatcgtgatgttcaagcgaggccactttctgattctgatcgt
gtaaagattaaaaaggctctacgtggagtgagggttgaagttacacaccgaggaaatatg
cgcagaaaataccgtatctctggtttaacatcccaggcaacaagagaattaacttttcct
gtggacgaaagaggaacgatgaaatcggttgttgaatactttcatgaaacctacggtttt
gccattcaacatccatattggccttgtcttcaagttggaaatcaacagcgaccaaactat
ttacccatggaggtctgtaaaattgttgagggacaaaggtactccaagagattgaatgag
agacagataactgctttgctcaaggtgacctgtcagcgccctcaagaaagggagcgtgat
attatgcagacagtacgtcataatgcctatgctgaagatccttatgcacaggagttcgga
attaaaattagtgagaatctggctcaggttgaagctcgtattcttcctccaccatggctt
aaataccatgatactggaagggaaaaggattgcctgccccaagtcggacagtggaatatg
atgaataagaaaatggtaaatggaggaaaagtaaccaattggatctgcataaatttttcc
cgcaacgtacaagacagtgtggcaaaaggattttgttatgaacttgctcagatgtgtcac
atttctggcatggcatttaaccctgagcccgtgcttccaccagtcagtgctcgacctgat
caggtggaaaaggtcttaaaaactcgataccatgatgcaatgactaagattccgggcaag
gagcttgaccttcttgtcgtcattttgccagataataatggctctctttatggtgattta
aaaaggatctgtgagacggatcttggccttgtatcccagtgctgtttaactaaacatgtg
tttagaatgagtaaacagtatttggcaaacgttgccttgaagataaatgtgaaggtcggg
ggacggaacacagtacttgttgatgcaatctccaggcgtattcccttggtcagcgaccgt
cctacaataatttttggcgctgatgtgacgcatcctcatccaggggaggattcaagccca
tcaattgcagctgttgtggcttctcaagactggccggaaattaccaagtatgctggttta
gtatgtgctcaagcccatcgtcaggagctcatccaagatttgtttaaacagtggcaggat
ccagtaaaagggacaatgtctggtggaatgataaaggaactgcttatttcctttcgtaga
gcaacagggcagaagcctcaacgcatcattttctacagggatggtgtcagcgagggccaa
ttctaccaagttctattgtatgaacttgatgcaattcgtaaggcctgcgcttcactggag
ccaaattatcagcctcctgtgacttttgttgttgttcaaaagcgtcatcatacaagattg
tttgccgacaaccatcgtgatcgcaatgcaattgacaggagtgggaacatattacctggt
acggtcgtggactccaaaatctgtcacccaactgagtttgacttctacctctgcagccat
gcaggaattcagggtacaagccgcccagctcattaccatgtgctgtgggatgaaaataag
ttcacagcagatgcactccaatcccttaccaataatctttgctatacatatgcaaggtgt
acacgctcagtttcaatcgttcctcctgcatattatgctcatctcgcggcgttccgagcg
agattttacatggagcctgagacctcagatagcggttcaatgtcaagtggtgctcatgga
cgtggaggtggcatggctggtgctggtggaggacggagcactcgagcaccgggtccaaat
gctgctgtgaggcctttacctgcactgaaagagaatgtgaagaaggtcatgttctactgc
tag
DBGET
integrated database retrieval system
