Rosa chinensis (China rose): 112176810
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Entry
112176810 CDS
T06020
Name
(RefSeq) auxin response factor 1
KO
K14486
auxin response factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112176810
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112176810
NCBI-ProteinID:
XP_024170667
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All DBs
Position
7:38481200..38489224
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AA seq
675 aa
AA seq
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MALSASNHPSGVSRPGTSDALFKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMHQ
MSEQQMPSFNLPSKILCKVVNVQLRAEPETDEVYAQVTLLPETDQSEVTSPDPPLPEIPR
CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRH
IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGETGELRVGVRRLMRQPSNMPSSVIS
SHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFLVSVNKYLEARSHKLSVGMRFKMRF
EGEEVPERRFSGTIVGVGDNTSPGWANSEWRSLKVQWDEPSSILRPDRVSPWELEPLVAT
TPLNSQPALRNKRARPPVLPSSSPDLSALGEWKSQVESPSAFSYNDPQRGRDLYPSPKYS
SASKANSLCFKGNNSLAAVSANPMFWSNRVEAVTESLSPVMRDSVERRQSTGNGYRLFGI
QLLDNSNVEETSPMVASGKLGDVQPISSFDAESDQHSEPSNVNRSDLPSGSCDAEKSSLR
SPQELQSRQIRSCTKVHMQGIAVGRAVDLARFEGYEDLLKKLEYMFDIEGELSGSTKKWQ
VVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKRLSPKIKLPVGGEAKQGKPDSEA
AINAEDGSSIMGTAY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcggcttcaaatcatccctcaggagtttcccgtccagggacaagtgatgct
ttgtttaaggagctatggcatgcttgtgctggaccccttgtcaccctgccacgtgaaggg
gagcgagtttattactttccccagggacacatggaacagctggaggcgtcaatgcatcag
atgtcggagcagcaaatgccttcattcaatctgccatccaaaattttatgtaaagttgtt
aatgttcagcttcgggctgaaccagaaaccgacgaagtttatgcacaagttactctgcta
ccagaaactgatcaaagcgaggtaacaagcccagatcctcctctcccagaaattccacgc
tgtacagtccattcattttgcaagacacttactgcttctgacacaagcacacatggggga
ttctctgtccttcggaggcatgctgatgattgtctgccaccactggatatgtctcagcag
cctccttggcaagaactagttgcaactgatctacacggaaatgaatggcattttcggcat
atatttcgagggcaacctaggcgccacttactcacaactgggtggagtgtctttgttagt
tccaaaaaattagtagctggtgatgcgtttatattcctaagaggtgagactggggagctg
cgtgtcggtgtcaggagactgatgagacaaccaagcaatatgccatcttctgtcatttct
agtcacagtatgcatcttggagtcctagctactgcatctcatgccattgcaactgggaca
ctattttcggtcttctacaagccaagaacaagtcgatctgagttccttgttagtgtcaac
aagtaccttgaagctcgtagtcacaaactctctgttgggatgaggtttaagatgagattt
gagggtgaggaagttcctgaaagaaggttcagtggcacgattgttggtgttggggataat
acatcacctggatgggcaaattctgagtggcgatctctaaaggtccaatgggatgaaccc
tcatctatattgcggccagatagagtctcaccttgggaattggagcccttggtagcaact
actccactaaactcccaacctgcactgagaaacaagcgggcacgacctcctgttttacct
tcctcatccccagatctttctgcactgggtgagtggaaatcccaagtagaatctccttcg
gctttctcatataatgacccacagcgtggtcgagacctctatccatcacccaagtatagt
tctgcttcaaaagccaattctctttgttttaagggcaataattctctagctgctgtttct
gcgaacccaatgttttggtccaatcgagttgaagccgttacggagtctttatcacctgtt
atgagagattcggtggaaaggagacaaagcactgggaatggctataggctgtttggaatt
cagttgcttgataactctaatgtagaagagacttcacccatggtagcgtctggaaagctg
ggggatgttcaaccaatttcttcatttgatgctgaatctgaccaacactcagaaccatca
aatgtcaaccgatctgatcttccttcaggaagttgtgacgctgaaaaatcatccctcaga
tcacctcaggaattgcaaagcaggcaaattcggagttgcacaaaggttcatatgcaaggg
attgcagtaggaagagctgtagatttagcacggtttgagggatatgaggacctgcttaag
aaactggaatatatgtttgatattgaaggcgagctgagtggatctaccaagaaatggcaa
gttgtctacactgatgatgaggatgacatgatgatggttggggatgacccatggcatgag
ttctgcagcatggtaaggaagattttcatctatacagtggaggaagtgaagaggttgtca
cccaagataaaacttccagtaggtggagaggctaaacaaggcaagccagattctgaagca
gctatcaatgcagaagatgggtcgtctattatggggacggcatattga
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