Rosa chinensis (China rose): 112176858
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Entry
112176858 CDS
T06020
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112176858
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112176858
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112176858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
AF_0924
Prok-RING_4
DUF3487
Motif
Other DBs
NCBI-GeneID:
112176858
NCBI-ProteinID:
XP_024170728
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All DBs
Position
7:49438947..49445492
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AA seq
446 aa
AA seq
DB search
MGTMNLVVVLTVLLFGKFCMADANVVLIGSNVTLSFEDVEANFAPAVRGSGECGVLYLAE
PIDACSTLTKKAGPGTNYSSPFVLIIRGGGCSFEEKVRRAQEAGFKAAIVYDNEDDGVLV
SMAGSSAGIKIHAVFVSKASGEILKMYTGLTNMEVWLIASFENSAWSIMAISFISLLAMS
AVLATCFFVRRHRIRRERPQASRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSVTCAICL
EDYSVGEKLRILPCCHKFHAVCVDSWLTSWRTFCPVCKRDARANMSDLPASESTPLLSPG
PSSVASSVLSSRRSSLASSSAIQIVPESSRSPYVSHPHSLSSTYIQQSLRSSFRQSPSMS
VSRSSVDLRNSSSQRSHASYFISPHSSYYPSLSPLNSRYLTVPIPSASNASPSFLSSSSH
QQHPLHCSESAATFSPFASAHSLPEC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaatgaatctggtcgtggttttgacggtgcttctctttggcaagttttgcatg
gcggatgccaatgtggtcttgattgggagcaacgtcaccctctctttcgaggacgttgaa
gctaattttgctccggcagttaggggttctggggagtgtggagtgttgtatttggctgag
ccgattgatgcatgctcgacattgactaagaaagccggaccgggcacgaattatagctcc
ccttttgtgttgattataagaggagggggttgcagttttgaggagaaagttaggagagct
caagaggctgggttcaaagctgcaattgtctatgacaatgaagacgacggcgtcttggtt
tcaatggcaggaagttcagctggtataaaaatacatgcagtttttgtttcaaaagcttct
ggggaaattctcaaaatgtacactggactcactaacatggaggtgtggctaattgcaagc
tttgagaactcagcatggtctatcatggcaatctccttcatttccttgctcgccatgtct
gcagtattggctacttgctttttcgttcgcagacatcgcataagacgagaaaggcctcaa
gcttctcgggtccgagaatttcatgggatgagcagtagattagtaaaagcaatgccaagt
ttgatatttactgccgttttagaggacaactgcacttcagtaacatgtgcaatatgcctt
gaggactacagtgttggagagaaacttaggattctgccttgttgtcacaagtttcatgct
gtctgtgtggactcttggcttacttcatggagaaccttttgcccagtttgcaagcgtgat
gcaagagccaacatgagtgatctaccagcttcagaatcgacaccattgctttcacccggc
ccatcctctgtggcctcgtctgtactgtcatctaggagatcatcactagcatcatcttca
gccattcagatagtaccagaatcatcaaggtctccttatgtttctcatcctcactctctt
tctagcacatacatccagcagtctcttaggtcctccttccgccagtccccttctatgagt
gtaagccgaagctcagtagacctgcggaattcctcatcccaaaggtctcatgcttcctat
tttatttctccccactcctcgtactacccatctttatcaccactgaactcgagatatctg
actgtacccattccaagcgcaagcaatgcttcaccaagtttcttgagttcttccagtcat
caacagcatccactacattgtagtgagtcagcagcaaccttttctccttttgcttctgct
cattctcttcctgaatgctga
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