Rosa chinensis (China rose): 112176913
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Entry
112176913 CDS
T06020
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112176913
03036 Chromosome and associated proteins [BR:
rcn03036
]
112176913
Spliceosome [BR:
rcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112176913
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112176913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
Lsm_interact
DUF7698
xRRM
Motif
Other DBs
NCBI-GeneID:
112176913
NCBI-ProteinID:
XP_024170815
LinkDB
All DBs
Position
7:37212029..37220673
Genome browser
AA seq
849 aa
AA seq
DB search
MQQNPHSSAAREREKKNPIEIKSEMEEETLNPEPETLTLQENNNGDQPMLDAADQNPNSS
SSDSDSDSGSGSDDEDQAQQNLEIQTLEAELATNPSNYDAHVQYIQILRKMADIEKLRRA
REAMSMLLPLTPSMWQDWAKDELAMGSGPETFSTVEKLYEQGVSDYLSISLWRDYLNFVR
ENDPSVKESSPAGISKERDLFERALTAAGLHVSEGNKIWEAYREFEQAICDTIDGTDTQQ
AREKQIQRIRVIFQRQLSVPHVNMRSTLLAYKAWEMEQGTIVDTGFSDQDGISSHVAAAY
QKALEIYNARVHFEEQISQHDMPEIERLEKFMNYLKFEQSSGDPARVQVLYERAIAEFPI
ASQLWLDYTSYLDKTLKVGRIISNVYSRAVKNCPWVGELWVRYLLSLERGHASEKEIAAV
FYKSQQCTFSTLDEYVELFLTRIDGLRRRLSCPVEGEHALDYSLFRDTFQSASDYLSPQM
KNTDVLLRLYAYWARLELHLGKDLVAARGVWESLLKISGTMMEAWLGYIAMEIESGHVNE
ARSIYRRCYGKKFSGTGSEDICYLWLRFEREFGSLDDFDYAERKVAPRLQELQLLRSKQE
SKLTEERENSLKKNVREKRKQASDVSDEQPPAKRQKDATQKQKKVHGKDYEVQNKAEQNE
GKEMKAKGAKDVQNEMKEPVLEKTKVYADQCTAFVSNLSLKANNEHLHQFFSDVGGVVAI
RILKDKFTGNSRGLAYVDFSDDAHLAAAIAKNKQTLLDRKLSIARSNPKRGKKEHGHTDQ
TGAASGSGETSNEPRARQGSDSAIKRKNTFAVPRNVAALGWITNKPKTQDPDDEKPKSND
EFRNMFLKG
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaacccacactccagtgcagcgagagagagagagaagaaaaacccaatagaa
atcaaatcagagatggaggaagaaaccctaaatcctgaaccagagaccttgactttgcaa
gagaacaacaatggagaccaacccatgctggatgccgctgaccaaaatcctaactcctcc
agctccgattctgattccgactccggctccggctccgatgacgaagaccaagcccagcaa
aacctggagattcaaacactcgaagccgagctcgcaaccaacccctccaactacgatgcc
catgtccaatacattcagattctgaggaaaatggctgacattgaaaagctgaggcgagcg
agggaagctatgagtatgctgttgcctttaaccccctctatgtggcaggattgggctaag
gacgaacttgctatgggctccggacccgagacgttttctacagttgaaaagctttatgag
caaggagtctctgattatctgtccatctctctttggcgagactacttaaattttgtccga
gaaaatgatccgtcagtaaaagaatcttcacctgctggtatttcgaaggaaagagattta
tttgagcgtgctcttactgcagctggtttgcatgtatctgaaggcaataagatatgggaa
gcttacagggagtttgagcaagctatatgtgatactatcgatgggactgacactcagcag
gcaagagagaagcaaattcagcgcattcgtgttatattccaacgtcagctatcagttccc
catgttaatatgagatcaacacttttggcttacaaggcatgggagatggaacaaggaacc
attgttgacactggcttcagtgatcaggatggtatttcatctcatgttgccgcagcatac
caaaaggcattggaaatttataatgcccgtgttcattttgaagaacaaatcagtcagcat
gatatgcctgagatagaaagactggaaaagttcatgaactacttgaaattcgagcaatct
tctggagatcctgcccgtgttcaagtgttgtatgaacgggctattgctgagtttcctata
gccagtcagctctggcttgattatacttcctatttggacaaaactttgaaggttggcaga
attataagcaacgtttattctagggctgtaaagaattgcccctgggttggagaactttgg
gtcagatatttgctttccttggagcgtggccatgcttctgagaaagagattgcagctgtg
ttttacaagtcccagcaatgcaccttttcaacccttgatgagtacgtggagttgtttctc
acccgcatagatggcttaagacgaagactatcatgccccgttgaaggagagcacgccttg
gattattcattgttcagggatacatttcagtctgcatcggattacctatcaccacagatg
aagaacacagatgtcctgttacgtttgtatgcttattgggcccgcctagagctacatctg
ggaaaagatttagttgctgctcggggggtttgggaaagtttactgaagatcagtggtacg
atgatggaagcctggctaggttatatagcaatggaaattgaatcgggccatgtgaatgaa
gctcggtccatatataggagatgctacggtaaaaaattttccggcactggttcagaggac
atttgctacttgtggttgcgctttgagagggagtttgggtcgttggatgatttcgactat
gcagaacgtaaggttgctccccgtctgcaagagcttcaactattaaggtccaagcaagaa
tccaaattgactgaagagagggagaattctctaaaaaagaatgtgcgtgagaagagaaag
caagcttcagatgtaagtgatgaacaacctccagcaaagaggcaaaaggatgcaactcaa
aagcaaaagaaagtgcatgggaaggattatgaggtgcagaacaaagctgaacaaaatgaa
gggaaagagatgaaagccaagggggccaaagatgtacaaaatgagatgaaagagcctgtt
ctagagaaaacaaaagtatacgctgaccaatgcactgcttttgtatcaaaccttagctta
aaggcaaataatgaacatcttcatcagttcttcagtgatgttggaggagttgttgctatt
cgaatactgaaggacaagttcactggaaattcaaggggactagcatatgtggacttctca
gatgatgcacaccttgctgcagccatagcaaaaaataaacagacactcctagacaggaag
ctgagcattgcacgatcaaatccaaagcgtggcaagaaagaacatgggcacactgatcaa
actggggcagccagtggatctggtgagacctccaatgaacctagagcacgccaaggaagc
gacagtgcgattaagaggaagaacacatttgcggttccgaggaatgttgctgcacttggt
tggatcacgaataagccaaaaactcaggatccagatgatgaaaagccaaaatctaatgat
gagttcagaaacatgttcctgaaaggttag
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