Rosa chinensis (China rose): 112176919
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Entry
112176919 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112176919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112176919
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112176919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112176919
NCBI-ProteinID:
XP_024170828
LinkDB
All DBs
Position
1:28547811..28551272
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AA seq
707 aa
AA seq
DB search
MMLNSQEEDHVELSINPDFPPDYHGYPSYSGPKNGRIDEGKSEPSSIERARSESSPLLAA
IWEKPSTVKGIFADVSKWDKIFITSCIIAVLLDPLFFYIPYIHEDNKCLGKDKTLGIAAI
LLRSLTDITFIVNITYQIREWIKTGSIKIQKAGPPSKDVEDQRPTIVSEDSIDKGECTQF
AEEVVGIFCRTKKKTAGAKNKIAQKLPWLTLPVFIDILAVLPLPQVFIVYVFFEISGSGY
LDYRHMMNLFLLGQYVPRIFRIYLSSAEFTKTSGIWVKGAFNFFLYILASHVLGAFWYFF
SIQRETSCWHRACKKYMHNDEGCMSKFYCKGNQASPNTTITSFLEEHCPLSDNITSEQFN
FGIFLDGLKNNNTQHINFARKFFFSFWWGLRNLSNFGTNLTETSTYVWENLFAILISIIG
LLLFLYLIGNVQTLMQFETTKWEEIRRKIEMKRLDLEVWMQRNKIPNELKKKIIKSIKKK
LEEDKDANLENLFSILPWDTRKDLKRFLCVNALRNEPMLKDANPKVVKMICDYLKPVMYV
EKSSIFQAGEPLDMMLFITQGTVWTYSSSSTSDDTSLTGKQNLGSASPIMITKSLKEGNS
YGVEQLLRWVAVPDEHFSNLPRLNENVRSHSKVEGFTLMASDLRKVAIKCQGIWNFINAP
NPQEREEVARTTIAAAVRRFRNQLQAPKKSRSKPSAVGAQNSPINIV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaactcgcaggaggaagaccatgttgaactgagcataaacccagatttcccg
ccagattaccacggttacccaagttactcaggccccaaaaatggccgaattgatgaaggg
aaatcggaaccttcgagtattgagagagcacgctcagaatcttcaccactactcgccgct
atatgggaaaagccgtcgacggttaagggaatcttcgcagatgtttcaaagtgggataag
atctttataacttcatgcataattgcagtcttgctggatccattgttcttttacattcca
tatatccatgaagataacaagtgccttggaaaagacaagactttggggattgcagctatt
cttctgcgctcactcacagatatcactttcatagtgaatattacatatcagattcgtgag
tggattaaaactggttccattaaaatccagaaagctggtccaccctccaaggatgtagaa
gatcagagaccaaccatagtctcggaagattcgattgacaaaggagagtgcactcaattt
gctgaggaagtcgtagggatattttgccgaacaaaaaagaaaacagctggggcaaaaaat
aagatagctcagaagttgccgtggttgaccctccccgtgtttattgacattcttgctgtt
cttcccctcccacaagtgtttatagtatatgttttcttcgaaatcagtggctcaggatat
ttggattatagacatatgatgaacctctttcttcttggtcaatatgtgcctaggattttt
cgaatttatttatcgtctgcagaatttacaaaaactagtggaatatgggttaaaggtgca
ttcaatttttttctctacatccttgcgagtcatgtacttggagcattttggtattttttt
tcaattcaacgagagacatcatgttggcaccgagcttgtaaaaaatatatgcataatgac
gaaggatgtatgagtaagttctactgcaaagggaatcaagcttctccgaatacaactatc
acatcattcctagaggagcattgtcctctaagtgacaatatcacatcggaacaatttaat
tttggaatatttcttgatggtctaaaaaataataatacgcaacacataaattttgcacga
aaattcttcttctccttttggtggggcctaagaaacctaagtaattttggcacaaatctg
acagaaacaagtacctatgtgtgggaaaacttattcgccattcttatctccatcattggc
ttgctactgtttctttatctcattggaaatgtgcagacactaatgcagtttgaaactaca
aaatgggaggagataagacggaagattgaaatgaaaaggctcgatctagaagtgtggatg
caaagaaataaaatcccgaatgagctgaagaaaaagatcattaagagcataaaaaagaag
ttggaagaagacaaagatgccaatcttgaaaatctattcagtattcttccatgggatacc
agaaaagatcttaagcgttttctctgcgtgaatgcgctaagaaatgagccgatgctcaaa
gatgctaatccaaaagtggtgaaaatgatctgcgactatctgaagccggtgatgtatgtg
gagaagagcagtatctttcaagccggagaaccactcgacatgatgcttttcataacgcaa
ggcactgtttggacctattcgagtagtagtacaagtgatgatacttctctaacaggaaaa
caaaatctgggtagtgcttctccaataatgatcaccaagtcactcaaggaaggcaattct
tatggagttgaacaacttctacgttgggtagcagtacccgacgagcatttctccaacctt
cctcgcctgaacgagaatgtgagatctcattcaaaagtggaaggctttacactcatggcc
agcgacttgagaaaggtagccatcaaatgccaaggcatttggaacttcatcaatgccccc
aatcctcaagaaagagaggaggtggcacgtactacgatagccgcagcagtccgtcgtttc
cgaaatcagctacaagcaccaaagaagtccagatcaaagccgtcggcagttggggctcag
aactcgccaataaacatcgtttag
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