Rosa chinensis (China rose): 112176929
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Entry
112176929 CDS
T06020
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112176929
Membrane trafficking [BR:
rcn04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
112176929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
VBS_C3G9
Cauli_AT
DUF5089
DUF7605
TMPIT
CoV_S2
Laminin_II
MCPsignal
Occludin_ELL
PLU-1
Prominin
DUF3450
JHD
ING
Neur_chan_memb
DUF6988
EcsC
DUF948
DUF745
Endotoxin_N
Zw10_N
CC_BshC
V-SNARE
Motif
Other DBs
NCBI-GeneID:
112176929
NCBI-ProteinID:
XP_024170843
LinkDB
All DBs
Position
7:24200455..24206856
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AA seq
261 aa
AA seq
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MDPLSAISEELAEIDGQIADVFRALSNGFQKVEKIKDSNRQSRQLEDLTDKMRDCKRLIK
EFDKEVKNMERRIDPDTSRMLSEKKQSMIKELNSYVALKKQYATNLENKKVDLFDAPANE
YGEQNVLLASGMTNQQLIDNGHQMMDETDQAIDRAQKVVHETINVGTETAATLKAQTEQM
SRIVNELDSIHFSIKKATKLVKEIGRQVATDRCIMGFLVLIVIGVIAIIIVKIVHPNNKD
IRDIPGLAPPAMNRKLLWSPY
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttatctgcaatcagcgaggagctggcggagatcgacggccaaatcgccgac
gtcttccgtgcgttatcgaatgggtttcagaaggtggagaagatcaaggactcgaatagg
cagagccggcagctggaggatctcactgataagatgcgggactgtaagagacttatcaaa
gagtttgacaaggaagtaaagaatatggagagacgaattgatccagacacaagtagaatg
ctgagtgagaaaaagcaatcaatgatcaaagagttgaactcatatgtggctttgaaaaaa
caatatgcaacaaatcttgaaaacaagaaagtggatctctttgatgcaccagctaatgaa
tacggggaacaaaatgtgttgcttgcctcgggtatgacaaatcagcaacttattgataat
ggacaccaaatgatggatgagactgatcaagccatcgatagagcacaaaaggttgttcat
gagactatcaatgttggaacagagacagcagcaactctcaaggctcaaactgaacaaatg
agtaggattgttaacgagctggactctatccatttctcaatcaagaaggctaccaagctg
gtgaaggaaattggtaggcaggttgcaactgataggtgtattatgggatttcttgtcctt
attgtcattggagtcatagccatcatcattgtgaagatcgttcatccgaacaacaaagac
attcgagatattcctgggcttgcccctcctgcgatgaaccgaaaattactgtggagtcct
tattga
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