Rosa chinensis (China rose): 112176948
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Entry
112176948 CDS
T06020
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
rcn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112176948
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112176948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112176948
04131 Membrane trafficking [BR:
rcn04131
]
112176948
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rcn04091
]
112176948
Chaperones and folding catalysts [BR:
rcn03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
112176948
Membrane trafficking [BR:
rcn04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112176948
Autophagy
ER-phagy
Other ER-phagy associated proteins
112176948
Lectins [BR:
rcn04091
]
L-type lectins
112176948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
112176948
NCBI-ProteinID:
XP_024170858
LinkDB
All DBs
Position
7:complement(7920264..7923401)
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AA seq
551 aa
AA seq
DB search
MAGIRSGVVSVLFVLVACFSIQQLSASDDTVFYDSFDESFEGRWTVSGKDEYQGVWKHSK
SEGHEDFGLLVSEKAKKYAIVKELDEPVSLKDGTVVLQFETRLQNGLECGGAYLKYLRPQ
EAGWEPKIFDNESPYSIMFGPDKCGLTNKVHFIFKHKNPKSGEYVEHHLTTPPSVPADKL
SHVYTAIIKPDNELIILVDGEEKKKANFLSTDDFMPPLIPAKTIPDPEDKKPEDWDERAK
IPDPNAVKPDDWDEDAPMEIEDDEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGEWEA
PKIDNPKCVTAPGCGEWKRPMKRNPAYKGKWHAPLIDNPSYKGIWKPQEIPNPSFFELEK
PNFEPIAAVGIEIWTMQDGILFDNILITKDEKVAQSYRETQWKPKFEVEKEKEKAEEDVP
SSEGLLANVQKKIFEILYKVADVPFLATHKSKIIDLIEKAEEQPNITLGVIGSIAVIILT
ALFMFLFGGKKPTKVEKKPTVATEASGSGVEKKEEESEKEGSSGEKEGSSGENEKETGAA
PRRRTGPRREN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgggattcgctccggcgtcgtttcggtgttgttcgtgctcgttgcctgcttctct
attcagcagctttctgcttccgacgatacggtcttctacgattcgttcgacgaatcattt
gaagggcgttggaccgtgtccggcaaagatgaatatcaaggtgtttggaagcactcaaag
agtgagggccatgaggattttgggcttcttgtgagtgagaaggccaagaagtatgcaata
gttaaggagcttgatgagcctgtgagcctcaaggatgggactgttgtccttcaatttgag
actcgtctccagaatgggcttgaatgtggtggtgcctatctgaaataccttcgaccccag
gaggctggatgggaacctaagatatttgacaatgagtctccttattctatcatgtttgga
cctgacaaatgtgggcttacaaacaaggttcacttcattttcaagcataagaatcccaag
agtggagagtatgttgaacaccatcttaccaccccaccctctgttccagctgacaaactt
tctcatgtatacactgccattatcaaacctgataacgagttgataattctggttgatgga
gaggagaagaagaaggccaactttttatcaactgatgattttatgcctccacttatccct
gccaagacaattcctgatccagaagataagaagcctgaggattgggatgagagagccaaa
attccggatcctaatgcagttaaacctgatgattgggatgaggatgcacccatggaaatt
gaagacgatgaagcagagaaacctgaaggatggttggatgatgagcctgaggaggtcgat
gatcctgaagccacaaagccagaggattgggatgacgaggaggatggtgagtgggaggcc
cctaagattgacaaccccaagtgtgtgactgcccctggttgtggggaatggaagaggcca
atgaagaggaatccagcttacaagggaaaatggcatgcaccactcatcgataaccccagt
tacaagggtatttggaagcctcaggagattcctaaccccagtttcttcgagctcgagaaa
cctaactttgagcccattgctgctgttggtattgagatctggaccatgcaagatggtata
ttgtttgacaacattttgataacaaaagatgagaaagttgcacaatcataccgagagacc
cagtggaaaccaaaatttgaagttgagaaggagaaagagaaggctgaggaagatgttcct
agttcagaaggtctattagccaacgtccagaagaagatatttgaaattctatacaaggtt
gcagatgttcccttcttagctacccacaagtctaagataattgatctcattgagaaggca
gaggaacaacctaatatcacacttggtgtcatcggctccattgctgtgatcatcttaaca
gcacttttcatgttccttttcggtgggaagaaacccaccaaggttgagaagaaacccacc
gtagccactgaggcttctggaagtggtgtggagaagaaagaagaggagagtgagaaggaa
ggttcttcaggtgagaaggaaggttcttcaggtgagaacgagaaggaaactggtgctgct
cctcgtcggaggacaggacccagacgtgaaaactga
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