Rosa chinensis (China rose): 112177197
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Entry
112177197 CDS
T06020
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112177197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112177197
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
112177197
Membrane trafficking [BR:
rcn04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
112177197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
112177197
NCBI-ProteinID:
XP_024171204
LinkDB
All DBs
Position
7:8147264..8154330
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AA seq
1013 aa
AA seq
DB search
MAVVACFRLLLVFTVFLYAAESKYIQYNTTSVLVPGKLNVHLVAHSHDDVGWLKTIDQYY
VGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWRDQSEEVQDIVKELVSS
GQLELINGGMCMHDEAAPHYIDMIDQTTLGHRFIKQEFNLTPRIGWQIDPFGHSAVQAYL
LGAEVGFDSLFFARIDYQDRAKRKVDKSLEVVWRGSKSLGSSAQIFTGAFPANYEPPSDN
FYFEVNDAAPIVQDNMDLFDYNVPDRVNDFVSAALSQANITRTNHIMWTMGTDFKYQYAH
TWFRQMDKFINYVNQDGRVNALYSTPSIYTDAKYAADESWPIKSDDFFPYADNVNAYWTG
YFTSRPALKGYVRVMSGYYLAARQLEFFKGRSKSGPNTEYLADALAIAQHHDAISGTSKQ
HVANDYAKRLSIGYVEAEKVVAESLSCMTESSQAGCKSVVTKFQQCPLLNISYCPSSEVD
LSKGKDLVIVVYNSLGWKRKDVIKIPVVSKNVIVKDSTGKEIESQILPLLNASLSIRNSL
VKAYLGLSPSVTPSYWLAFSATVPPLGFSTYIVSSAKKTATTSERLITEYKTEQSQNNEI
EVGPGNLKLIYSGNDGKLIEYKNSRSSVKESVDQSFSYYPGDDGKHANKSDLQASGAYIF
RPNGTYPINSEGKGSLTVLRGPLLDEVHQRINSWIYQVTRVYKEKEHAEIEFTVGPIPID
DGIGKEIVTKITTSMKTNKQFYTDSNGRDFIERIRDYRKDWDLEVNQPVAGNYYPINLGM
YTKDNSKELSVLVDRSVGGSSIVDGQLELMIHRRLVYDDARGVGEALNETVCIQDDCKGL
TVTGKYYLRLDPIGEGAKWRRSLGQEIYSPFLLAFTEQDGDQWTKSHVTTFSGMDPSYSL
PDNVAILTIQELEDGKVLFRLAHLYEIEEDNDLAVMASVELKKVFADKKIKQITEMSLSA
NQGRAEMEKKRLVWKVEGSSEEEPKVSRGGPVDPTKLVVDLAPMEIRTFTINF
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtggcttgctttaggctcttactagtattcactgtgtttctatatgcggcg
gagtcgaagtacattcagtacaatacgacgtcggtccttgttcccgggaagctgaacgtt
catttggtcgctcacagccacgacgacgtcggatggctgaagaccattgaccagtactat
gttggctccaataattccatccagggagcttgtgttcagaacgtgctggattctttggtt
ccggcactgttagccgataagaaccgcaagttcatatacgttgagcaggcatttttccaa
agatggtggagagatcagagcgaggaggtgcaagacatagtgaaggagctggtcagctct
ggtcaactggagctcataaatggggggatgtgtatgcacgatgaggcggctccccattac
attgatatgattgatcagacaactctggggcatcgatttattaagcaggaattcaatctg
actcctagaatcggttggcaaattgatccatttggacattctgctgtgcaggcttacctt
ttgggggctgaggttggatttgactctcttttctttgcgcgaattgattaccaagacaga
gctaaacgaaaagttgacaaaagccttgaggttgtgtggcggggttctaagagtctaggt
tcatctgcgcagatttttactggtgcatttcctgcaaattatgaacctccaagtgataat
ttctactttgaagttaatgatgctgcccctattgtacaagataatatggatttgtttgac
tacaatgtgccggaccgcgttaatgatttcgtatctgctgctttgtcacaagcgaacatt
actcggacaaatcatatcatgtggaccatgggaactgattttaagtatcaatatgctcat
acatggtttcgtcagatggataaattcattaattatgtgaatcaagatgggcgtgtcaat
gccttgtactcaaccccatcaatatatactgatgccaaatacgcagcagatgagtcatgg
ccgatcaagagtgacgacttctttccatatgctgacaatgtaaatgcttactggactggt
tactttacaagcagaccagccctcaaaggctatgtaagagtgatgagtggctactatttg
gcagcaagacaattggaattttttaagggacggagtaaatcagggcccaacacagagtat
ttggctgatgctttagcaattgctcaacatcatgatgcaattagtggcacatctaagcag
cacgtggctaatgattatgcaaaacggctttcaataggttatgtggaggcggagaaagtt
gtcgcagaatcactttcttgcatgacagagtcatcacaagctggttgcaagagtgttgta
accaagtttcaacagtgtccccttctgaatattagctattgtccatcgtcagaagttgat
ctttcaaaggggaaagacctggttattgttgtctataattctctgggatggaaaagaaag
gatgtgataaagattcctgttgtcagtaaaaatgtcattgtaaaggactctactggaaaa
gaaattgaatcacagattctacccctgcttaatgcatccctaagcataagaaacagcctt
gttaaggcatatctgggtttatctccgagtgtgaccccaagttattggcttgcgttttca
gcaactgtaccacctcttggctttagcacttacattgtctcaagtgccaaaaagacagct
actacttcagagcgacttattacagagtacaagacagaacaaagtcaaaataatgaaatc
gaagtggggccagggaacttgaaactcatttattctggaaatgatggaaaactaattgaa
tacaaaaacagcagaagctcggtcaaagagtcggtagatcaatcatttagctactaccct
ggagatgatggaaagcatgcaaataaatctgatttacaggcctctggagcttatatcttc
cgtcctaatggtacatatcccattaactctgaagggaagggttctcttactgttttgagg
ggtccattgttagatgaagtacaccagaggatcaactcttggatataccaggtcactaga
gtgtacaaggaaaaagagcatgctgagattgaatttactgttgggcctatcccaattgat
gatggaattggcaaagagattgtaacaaagattacaaccagcatgaagactaacaaacaa
ttctacacagattctaatgggcgtgattttattgaaagaattcgtgactatagaaaagac
tgggacctggaagtgaatcaacctgttgctggaaattattatccgattaatctgggaatg
tacacgaaagataacagcaaagagctgtcagtattagtagatagatctgtgggtggatcc
agcattgtggatggacaattggaacttatgattcataggaggttggtctatgatgatgct
cgaggtgttggagaagcactaaatgaaactgtgtgcattcaagatgattgcaaaggacta
acagtcacaggaaagtactatctcagacttgatcctataggagagggtgctaaatggcgt
cgatcacttggtcaggagatatactctccatttcttttagccttcacagaacaggatgga
gatcagtggacaaaatctcatgtcacaaccttttcaggaatggatccttcctacagttta
ccagataatgttgcaatactaaccatccaggagctggaagatggaaaagttctctttcgc
ctggcacatttatacgagattgaagaggacaacgatcttgcggttatggcaagtgtagaa
ctaaaaaaagtgtttgcagacaagaagataaagcaaataacagaaatgagcttatctgct
aatcaaggaagagctgaaatggagaagaagagattggtctggaaagtagaaggctcctct
gaagaagaaccaaaagtgtcgaggggaggacctgttgatccaacaaagctggtggtggat
cttgctccaatggaaattcgaacatttacgatcaacttctag
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