Rosa chinensis (China rose): 112177218
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Entry
112177218 CDS
T06020
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112177218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112177218
03036 Chromosome and associated proteins [BR:
rcn03036
]
112177218
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112177218
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112177218
PBAF complex
112177218
GBAF(ncBAF) complex
112177218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
112177218
NCBI-ProteinID:
XP_024171252
LinkDB
All DBs
Position
7:complement(9466565..9469578)
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AA seq
540 aa
AA seq
DB search
MNNNNNNNQAKNVAVPPHFGNPGAVPQSIPINHQPHLLSQTQPQAQGASHFPGHFQLSEP
QAQALAQAQYVNAHAQAQNQAAHAQFQLQAQAQSLAQLHNASPGVSSPSIATPSTGTAKR
ANQKPPSRPQGSSQANTGPLFKNMELTPAARRKKRKLPDKQIPDKVAALLPESGLYTQLL
EFEARVDAALARKKVEIQESLKCPPRVQKMLRVYVFNTFENQTPTNPEKKDAHSPTWSLK
IIGRLLEDGRDPVVAGMPQKSRVKFSSLFKKITIYLDQSLYPDNPVILWESARSPALHDG
FEVKRKGDKEFSAVIRLEMNYVPEKFKLSPALTEVLGIETETRARVIAAIWHYVKARKLQ
NPNDPTFFMCDPPLQKVFGEEKMKFSMVSQKISMHLSPPQPIHIEHKMKLSGNCPAGTTC
YDILVDVPTPLEKEMSAFLASTERNKEIDACDELICASIKKIHEHRRRRAFFLGFSQSPA
EFINTLIASQSKDLKLVAGDASRNAEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPGST
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataataataataatcaggccaagaatgtggcagtgccgccccattttggc
aatcccggggctgtgccgcaatctattcccattaaccaccagccgcatcttctctctcaa
acacaacctcaagcacaaggtgcatcgcattttcctgggcactttcagttgtctgagccc
caagcgcaggcacttgcacaggcacagtatgtgaatgctcacgcacaagctcaaaatcaa
gccgcccatgcccaatttcagttgcaagctcaagctcagtctcttgcccaattacataat
gccagtccgggtgtttcgtcaccctccatagcaacgccaagcacaggaactgctaagcgg
gctaaccagaagccaccttctcggcctcaaggttcatctcaggccaatacaggtccactg
tttaaaaacatggagcttactccagctgctcgtagaaagaagcgaaagctacctgataaa
cagataccagataaagtggctgcacttctgccagagtctggtctatatactcagttgctt
gaatttgaggctcgtgttgatgctgctttggcaagaaagaaggttgaaatccaggaatca
cttaaatgtcctccccgtgttcagaagatgcttcgagtttatgtattcaacacctttgag
aaccagacaccaacaaatcctgagaagaaggatgcacattcccctacttggtctcttaag
ataattgggaggctattggaagatgggagggatcctgtggtggctggaatgccacagaag
tcaagggttaaattttcatccctcttcaagaaaattaccatatacttggaccaaagcctc
tatccagacaaccctgtgattttgtgggaaagtgctcgttcacctgctcttcatgatggc
tttgaggtgaagagaaaaggggataaggagtttagcgcagtaatacgattagagatgaat
tatgtgcccgagaaatttaaactttcaccagctctgactgaagttctgggaattgaaacg
gagactcgggcaagagttattgctgctatttggcattatgtgaaagcccggaagttgcag
aaccctaacgaccctaccttcttcatgtgtgatccccctctgcagaaagtttttggagaa
gagaagatgaagttttctatggtttcacaaaaaatatcaatgcacttatctcctccgcag
cctatacatatagagcacaaaatgaaactttcaggaaactgtccagctggaactacttgc
tatgatatactggttgatgtacctacgccgttagagaaggaaatgtcggcattcttggca
agcactgagcggaacaaagaaattgatgcttgtgatgaattgatctgtgcttctataaaa
aaaatccatgaacatcgtcggcggcgggctttctttcttggtttcagtcagtctccagca
gagtttattaatactctgattgcttcccagagcaaggacctaaagcttgttgctggagat
gctagtcgtaatgcggaaaaggagcgccgctcagatttctataatcaaccctgggttgag
gatgctgttattcgttacctgaaccgcaagtctgctggaagtgatgctcccggaagcact
tga
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