Rosa chinensis (China rose): 112177223
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Entry
112177223 CDS
T06020
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112177223
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GFIT
Motif
Pfam:
Sel1
TPR_19
TPR_16
TPR_2
TPR_1
TPR_CcmH_CycH
TPR_14
Motif
Other DBs
NCBI-GeneID:
112177223
NCBI-ProteinID:
XP_024171257
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All DBs
Position
7:971739..975198
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AA seq
688 aa
AA seq
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MDLVNRKLVFAAVAVFSLSAVTIFARPFVLVLSQDDILNAANPADGGDSPATDPTQNDSA
DWDEFGDSAYPQSEEELDPGSWRPIFEPDPFTPDLSAHPDKEYYSTVSKLVDSVSSGDTA
LMQDAVSEIEASAARGVPHARSVLGFLFGTGQMRKQNKAKAFTYHYFAADGGNMQSKMAL
AYTYFRQDMFEKAVKLYSELAEAAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEE
DEDFQILEYQAQKGNSLAMYKIGLFYYFGLRGLRRDHAKALSWFLKSVEKGEPRAMEFLA
EIYARGAGVERNYTRALEWLTLASKQELYSAYNGMGYLYVKGYGVEKKNYTKAKEYFEKA
AENRDAGGGHYNLGVLYLKGIGVKRDVKLACQYFIAAANAGQPKAFYQLAKMFHAGVGLK
KNLPRATVLYKLVAERGPWSSLSRWALESYLKGDVGKAFFLYSRMAELGYEVAQSNAAWI
LDKYGEHSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGQGTERDFE
RAAEAYKHARSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVTLAL
ASLWIRKNYADGFLVHLIDSLPEVYPKLEEWIDDVLLEEGNATILTLFVCLLTVLYLRER
QRRHAVVVPAGVAMPHQPNELVAPAPVI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatctggtgaatcggaaactggttttcgcggcggtggcggttttctctctctccgcc
gtcacgattttcgcgcggccgtttgttctggttctctcacaagacgacatcctaaacgcc
gctaacccggccgacggcggcgactctcccgccaccgatccgactcagaatgactcggcc
gactgggacgagttcggcgactcggcgtatccgcaatccgaggaggagctcgacccgggc
tcgtggcgtcccatcttcgaacccgacccgttcacgcccgacctgtccgcccacccggac
aaggagtactactccaccgtgtcgaaattggtcgactccgtcagctccggcgacacggcg
ctcatgcaggacgcggtttccgagatcgaggcgtccgctgcccgcggtgtgcctcacgcg
cggtccgttctcgggtttctgttcggcacggggcagatgaggaagcagaacaaggccaag
gcgttcacgtaccattacttcgccgcggacggcggcaatatgcagtcgaagatggctctg
gcttatacctactttaggcaagatatgtttgagaaagcggtgaagctgtactcggaatta
gccgaggcagctgtgaatagcttcttgatttcaaaggactctccggtgattgagccggtg
aggatccacaatggagctgaagagaataaggaggcattgaggaaaagccgaggcgaagaa
gatgaggactttcagattctggagtatcaggctcagaaggggaattctcttgcaatgtat
aagattggcctcttttactatttcgggctcagagggttgcgccgtgaccatgctaaggca
ttgtcgtggtttctcaagtctgtggagaagggagaacctagggctatggagtttcttgct
gagatttatgctagaggagctggggttgagaggaattacactagggctctggagtggctt
acattagcatctaaacaagaactgtattcggcttataatgggatgggctatttgtatgtt
aaaggatatggagtggagaagaagaactacactaaggcaaaagagtactttgagaaggct
gctgagaatcgagatgctggtggcgggcactataacttgggagtactttatctcaaaggg
attggggtaaaaagagatgtgaaacttgcatgtcagtactttatagcggctgctaatgca
ggtcaaccaaaggcattctaccagcttgcaaagatgtttcatgcaggagtggggcttaag
aaaaatcttccccgggctactgtgttgtacaaactagttgctgaaagggggccatggagt
tccttgtccagatgggcactggagtcatacttaaagggggatgtggggaaggcatttttc
ttatactcaaggatggctgagttagggtatgaggtagcgcaaagtaacgctgcatggatt
cttgacaagtacggagaacatagcatgtgcatgggagaatctggcttttgtacagatgca
gaaaggcatcagcgggcacattctttgtggtggcaagcatctgagcagggtaatgaacat
gctgctttgctgattggggatgcatattactatggtcagggtactgagagggattttgaa
cgtgcagcagaggcttacaagcatgctaggtcccaatctaatgcacaagccatgttcaac
ctcggttacatgcatgaacatggacaaggattacctttggatctccatcttgccaaacgt
tactatgatcaagccctagagattgatccggcagcaaagttaccagtcacgctagccctt
gcaagcttatggatacgaaagaattatgccgatggttttctggtccatttgatcgactca
ttgcctgaagtctatccaaaattggaagaatggatagatgacgtgttgcttgaggaagga
aatgcaacaatattgactctttttgtttgtctcctcactgtcctatatctccgtgagcga
caacgcaggcatgctgtagtagtccctgctggagtggctatgccgcaccaaccaaatgag
cttgttgcacctgcacctgtcatttag
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