Rosa chinensis (China rose): 112177228
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Entry
112177228 CDS
T06020
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112177228
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112177228
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
112177228
NCBI-ProteinID:
XP_024171277
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All DBs
Position
7:58208150..58214554
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AA seq
640 aa
AA seq
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MSSLGVQLHIQDHHVIMDNGILQVTLSNPDGIVTGIQYNGIDNLLEVLDEEANRGYWDLV
WSETGSTGTTGTFDPIIGTKLTVIVESEEQVEISFTREWNHEDKNVPLNIDKRFVMLRNS
SGFYSYAIYEHLKEWPPFNLPQTRIVFKLSKEKFQYMAIADNRQRNMPLPDDRSPERSQI
LNSEFPEALLLVNPIEPQYKGEVDDKYQYSCENQNLWVHGWICMDPHVGFWQITPSDEFR
SGGPLKQNLTSHVGPYCLAKFLSAHYSGEDLVLKLKPNEPWKKVFGPVFIYLNSASHAID
SSPLWEDAKKQMMTEVQSWPYDFPASNDFPTSKQRGNVSGRIRVRDSFVSDDHILGHGAY
VGLAPPGDVGSWQRDCKGYQFWTRADENGYYSIKNIREGDYNLYAWIPGFIGDYRYGLTI
NITPGCNIDLGDLVYEPPRDGPTLWEIGYPDRSAAGFYVPDPNPKYINKLYVNHPDRFRQ
WGLWERYAELYPNEDLVYTIGTSDYAKDWFFTQVTRKKDDGTYQGTTWKIKFQLDNVSQT
KIYKLRLALATANIAELQIRINDSKADPPLFTTGVIGHDNTICRHGIHGLYRLYSIDVSS
TLLVKGDNTVYLTQAMSTSPFVGIMYDYIRLEAPSSSTSA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccctgggggtgcaattgcatattcaggaccatcatgtgattatggataacggc
atactccaagttacattatcaaatccagatggaattgttaccgggatccaatataacggc
attgacaatttacttgaagttcttgatgaagaagctaatagagggtattgggacctcgtt
tggagtgaaacgggaagtaccggaacaactggaacctttgatccaattataggaacaaaa
ctcaccgttatagtggaaagtgaagaacaagtagagatctcattcaccagagagtggaat
cacgaggacaagaatgtcccgctaaatatagacaaaaggtttgtaatgcttcgtaattcg
tcaggcttctactcgtacgccatctacgagcacttgaaagaatggcctcctttcaacctt
ccccagaccaggattgtgttcaagctcagtaaagagaagtttcagtatatggcgatagct
gataacaggcaaagaaacatgccccttcctgatgaccgatcaccagagagaagccaaatc
ctaaactcagaattcccagaagcactccttcttgtcaatcctatagagccacaatataag
ggagaggtggatgacaagtaccaatactcatgcgagaaccaaaatttgtgggttcacggt
tggatatgcatggaccctcatgtagggttttggcagataacgcccagtgatgagttccga
tctggcgggcctcttaaacaaaacctcacctcccacgtcggtccttattgtcttgcaaag
tttctgagtgctcactattcaggagaggaccttgtgctgaagcttaaaccaaatgagcca
tggaaaaaagttttcggccctgtttttatctatcttaattccgcatctcatgcaatagat
tcatcaccactttgggaagatgcaaagaaacagatgatgacagaagtacagagctggcct
tatgactttccagcttccaatgattttccaacgtcaaagcaacggggtaatgttagtggt
agaatacgtgttcgagatagctttgttagcgacgatcacatactcggccatggtgcttat
gttgggttggcaccccctggagatgttggatcatggcaaagagattgcaagggttaccag
ttctggactagggcagacgagaatggctactactctatcaaaaatatacgtgagggggac
tacaatctctacgcgtggattcctgggtttattggagattaccgctatggtttaaccatt
aacatcactccaggttgtaatattgaccttggtgatcttgtatatgagcctccaagggat
ggaccaacattgtgggaaattggttacccggatcgctctgctgctggattctatgttccc
gatcctaatccaaagtatatcaataaactttatgtaaaccatcctgacaggtttaggcag
tgggggttatgggaaagatatgccgagttatatcctaatgaggatttagtttacactatt
ggaactagtgactatgctaaagattggttctttactcaagttaccaggaagaaagatgat
ggcacatatcaagggactacatggaaaatcaagtttcagcttgacaatgtcagtcagacc
aaaatctacaaacttcgattggccctcgctactgcaaatattgcagaattacagattcgc
ataaatgattccaaagcagaccctcctctgtttacgaccggtgtgattggacacgacaac
acaatttgcagacatggaattcatggtctctacaggctgtatagcatagatgtatccagc
acattgcttgtgaaaggtgacaatacagtgtatctaactcaagcaatgagcaccagccct
ttcgtgggaatcatgtatgactatattcgtttagaagctccatcatcttcaacttccgcc
taa
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