Rosa chinensis (China rose): 112177229
Help
Entry
112177229 CDS
T06020
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112177229
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112177229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
112177229
NCBI-ProteinID:
XP_024171280
LinkDB
All DBs
Position
7:58216302..58228572
Genome browser
AA seq
640 aa
AA seq
DB search
MSSLGVQLHIQDDHVIMDNGTLQVTLSNPGGIVTGIHYNGIDNLLEVLNEEDNRGYWDLV
WSETGSIGTTGTYDRIIGTKFTVIVKSEEQVEISFTREWNHEDKNVPLNIDKRFVMLRNS
SGFYSYAIYEHLKEWPPFNLPQTRIVFKLSKEKFQYMAIADDRQRNMPLPDDRLPERCQI
LNSDFPEAVLLVNPIEPQYTGEVDDKYQYSCENQNLRVHGWTCMDPHVGFWQITPSDEFR
SGGPLKQNLTSHVGPICLAMFLSAHYSGEDLVLKLKPDEPWKKVFGPVFIYLNSASDAKD
SSPLWEDAKKQMMTEVKSWPYEFPASTDFPTSKQRGNVSGRIRVGDSFVSDDHILGHGAY
VGLAPPGDVGSWQRDCKGYQFWTRADENGYYSIKDIREGNYNLYAWVPGFIGDYRYGLTI
DLTPGCDIDLGSLVYEPPRDGPTLWEIGYPDRSAAGFYVPDPNPKYINKLYVNHPDRFRQ
WGLWERYAELYPNEDLVYTIGTSDYTKDWFFAQVTRKNDDGTYQGTTWKIKFQLDNVSQT
KIYKLRLALATANIAELQIRINDSKADPPLFTTGVIGHDNTICRHGIHGLYRLYTIDVPG
TLLVKGDNTVFLTQALSTSPFVGIMYDYIRLEAPSSSTSA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccctgggggtgcaattgcatattcaggatgatcatgtgattatggataacggc
acactccaagttacattatcaaatccaggtggaattgttactgggatccattataacggc
attgacaatttacttgaagttctcaatgaagaggataatagagggtactgggaccttgtt
tggagtgaaacgggaagtatcggaacaaccggaacctatgatcgaattataggaacaaaa
ttcactgttatagtgaaaagtgaagaacaagtagagatatcattcactagagagtggaat
cacgaggacaagaatgtcccgctaaatatagacaaaaggtttgtaatgcttcgtaattcg
tcaggcttctactcgtacgccatctacgagcacttgaaagaatggcctcctttcaacctt
ccccaaaccaggattgtgttcaagctcagtaaagagaagtttcagtacatggcgatagct
gatgacaggcaaagaaacatgccccttcctgacgaccgattacccgaacgatgccaaatc
ctaaattcagatttcccagaagcagtccttcttgtcaatcctatagagccacaatatacg
ggagaggtggatgacaagtaccaatactcatgcgagaaccaaaatttgcgggttcacggt
tggacatgcatggaccctcatgtagggttttggcagataacgcctagtgatgagttccga
tccggcggacctcttaaacagaacctcacatcccacgtcggtcctatttgtcttgcaatg
tttctgagtgctcactattcaggagaggatcttgtgctgaaacttaaaccagatgagcca
tggaagaaagttttcggccctgtttttatctatcttaattctgcatctgatgcaaaagat
tcatcaccactctgggaagatgcaaagaaacagatgatgacagaagtaaaaagctggcct
tatgagtttccagcttccactgattttccaacgtcaaagcaacggggtaatgttagtggt
agaatacgtgttggagatagctttgttagcgacgatcacattctcggccatggtgcttat
gttggattggcaccacctggagatgttggatcatggcaaagagattgcaagggttaccag
ttctggactagggcagatgagaatggctattactctatcaaagatatacgcgaggggaac
tataatctctacgcgtgggttcctgggtttatcggagattaccgctatggtttaaccatt
gacctaactccaggttgtgatattgaccttggtagtcttgtatatgagcctccaagggat
ggaccaacattgtgggaaattggttacccggatcgctctgctgctggattctatgttccc
gatcctaatccaaagtatatcaataaactttatgtaaaccatcctgacaggtttaggcag
tgggggttatgggaaagatatgccgagttatatcctaatgaggatttagtttacactatt
ggaactagtgactatactaaagattggttctttgctcaagttaccaggaagaacgatgat
ggcacatatcaagggactacatggaaaatcaagtttcagcttgacaatgtcagtcagacc
aaaatctacaaacttcgattggcccttgctactgcaaatattgcagaattacagattcgc
ataaatgattccaaagcagaccctcctctgtttacgaccggtgtgatcggacacgacaac
acaatttgcagacatggaattcatggtctctaccggctgtatacaatagacgtacccggc
acactgcttgtgaaaggtgacaatacagtgtttctaacgcaagcattgagcaccagccct
ttcgtggggatcatgtatgactatattcgtttagaagccccatcatcttcaacttccgcc
taa
DBGET
integrated database retrieval system
