Rosa chinensis (China rose): 112177759
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Entry
112177759 CDS
T06020
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112177759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112177759
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112177759
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
CDC48_2
Motif
Other DBs
NCBI-GeneID:
112177759
NCBI-ProteinID:
XP_024171786
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All DBs
Position
7:30013269..30014566
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AA seq
379 aa
AA seq
DB search
MDLNENGSYDSDQTTYYSADSGMSDDEIGSDMGFEDDKAYEVGSDMSITDGDGEIGHSEP
SYGGHEYDDFVGTTPFWHRYHCYPASKTEKHAYTESSDKIIMPPSALDVLASLNIGYPML
FEFRPYSFDAAENNETEKFRVSHCGVWEFTAEEGFVYMPNWMMENMNLKEGDLVLLQNQT
LPKGSHVKLQPHTKDFLDIPDPKAMLEAALGTFSCLTTGDTIVLPYENKKYYMDIIETKP
SDAIGIIDTDCEVDFAPPLDYKEPEKPVASSIPLNKEADGQVDKPKFSPFKGTGRRLDGK
PLQYESALDSSSFVATNGNPQPCTESSSRATRRRVQGKLVFGADTAPKVASKEVKQQQQL
QEKEEPKFLAFTGKMYSLT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaatgaaaacgggagttatgattctgaccagactacatactactccgctgac
tccggcatgagtgatgatgagatagggtctgacatgggatttgaggatgataaagcttac
gaggtaggttctgacatgagtattactgatggggatggtgagatagggcactctgagccc
agttatggcggccatgaatatgatgattttgttggcacgacaccgttttggcataggtat
cattgttatcctgcatctaaaactgaaaagcatgcatacactgagagtagtgataaaatc
ataatgcctccctcagccctcgacgtccttgcttctctaaacattggttatccaatgttg
ttcgagttccggccatattcttttgatgctgccgagaataatgagactgagaaatttcgt
gtctctcattgtggggtttgggagttcactgcagaagaaggctttgtctacatgcctaat
tggatgatggaaaatatgaacttgaaagagggagaccttgtgctgcttcaaaaccagact
cttccgaaaggcagtcatgtcaaattgcagcctcatacaaaggacttcttggacatccct
gacccaaaagctatgttggaggcggctctcgggacgttttcttgtttaacaactggtgat
actattgtgctaccttatgagaacaagaaatattatatggatatcattgaaacaaagcct
tctgatgccataggcattattgacacagactgtgaggttgactttgcacctcctcttgac
tataaggaacctgagaaacctgttgcttcatcaattcctctgaacaaggaagcagatggc
caagttgacaaacctaaattcagcccttttaagggaactgggaggcgtttggatggcaag
cctttgcagtatgagtcagcattagattcttcctcatttgttgccacgaatggtaatcca
caaccttgtacagaatctagttcacgagctactagacgccgggttcaggggaagcttgtt
tttggcgcagatactgctccaaaggtagcctcaaaagaggtcaaacaacagcagcagctc
caagagaaagaagagccaaagttcctggcttttactgggaaaatgtactccctaacttga
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