Rosa chinensis (China rose): 112178110
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Entry
112178110 CDS
T06020
Name
(RefSeq) (-)-germacrene D synthase
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112178110
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112178110
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
DUF1539
Motif
Other DBs
NCBI-GeneID:
112178110
NCBI-ProteinID:
XP_024172082
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Position
7:complement(51080725..51083639)
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AA seq
570 aa
AA seq
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MSAKLVSTYQAQTPNGRSTPDVNRRSANYSPSIWGDHFLSYASMETASDENEQRVQELKE
EVKRMLRMAPTSQELNLIDEIQRLGVSYHFENEIHQMLQKIHNSSYDDQENNDDDELYII
ALRFRLLRQQGFEVSCKMFSKFIDVDGKFKRSLVTDVEGILKLYEATHLRTHGEDILEAA
LAFTTTHLELAVTAAQGGLSPPLLKRVTHALYQPQWKGYPRLEARRYLSFCQELKSSDIN
ETLLTFAKLDFNQLQRVHQKELSDITRWWKELDFVNKLPFARDRAVESYFWALGVYFEPE
YCFGRMTLCKIVAIIVVLDDVYDVHGTHEELELFTEAVERWDISALDLLPADYMKICYQA
LLDIYADIENELAKEGKLYRIHYARESMKVQVRSWFQEAKWFHEKYTPTLDEYMSAALST
TYFMMATTSFVLMGGDIVTKNSLDWVFTDPKMVKASSTIGRLMDDLQSHKFEQKRGHVAS
AIECYMKEHCATEEEATIELTKQVNNAWKDMNEGWLISAGAANVPRPLLLRIINLARVIE
VIYKHEDGFTHAETGLKDIITSLLVEPVPI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaattagtttcaacataccaagctcaaaccccaaatggcaggagtactcct
gatgttaatcgacgttcagctaattattctcccagcatttggggcgatcattttctatca
tatgcttctatggaaactgcaagcgatgaaaacgagcaacgggtccaagaattgaaggaa
gaagtgaagaggatgcttagaatggctccaacttcacaagaattaaatttaattgatgaa
attcaacgcttaggagtgtcctaccattttgaaaatgagattcaccaaatgctccagaaa
attcacaactcttcctatgatgaccaagaaaataatgatgatgatgagctttacataata
gctctacgttttcgattgcttagacaacaaggttttgaggtttcatgcaagatgttcagc
aagttcatcgacgttgatggaaaatttaagagatcacttgtcactgatgtggaaggaatt
ttaaaattgtatgaagccacacatcttaggacacacggagaggatatactagaagccgcc
ctggccttcactaccactcatcttgagttggcagtaactgctgcacagggtggtctaagt
ccaccacttctaaaacgagtaactcatgccttataccagccacagtggaagggctaccca
aggctagaagcaaggcgctacttgtctttctgccaagaactaaaaagttcagatatcaat
gaaacactcctgacttttgcgaagttggatttcaatcaattgcagcgagtccatcaaaaa
gaactaagtgatatcacaaggtggtggaaggagctggattttgtgaacaaattacctttt
gcaagagatagagcagttgaaagctacttttgggctttaggagtctactttgagcccgaa
tattgctttggtaggatgacattgtgcaaaatcgtcgccataatcgtggttcttgatgac
gtttatgatgtgcatggcacacatgaagaattagagctttttactgaagctgttgagagg
tgggacatctctgcattggatctactacctgcagattacatgaaaatctgttaccaggca
ctcttggacatctacgctgatattgaaaatgagcttgcgaaggaggggaagttgtatcgc
atccactatgccagagaatcaatgaaagttcaagtcagatcttggtttcaagaagccaaa
tggttccatgagaaatacactccaacgttggatgaatacatgtcagccgctctttccaca
acctatttcatgatggcaaccacatcctttgttttaatgggcggagatattgtcacaaaa
aattccttggactgggtgttcaccgacccaaagatggtaaaggcttcatcaacaataggc
agactcatggatgacttgcaatcccacaagtttgaacaaaagagaggacatgttgcctca
gctattgaatgctacatgaaagagcattgtgccacagaagaagaagcaacaatcgaactt
actaaacaagtgaataatgcatggaaagacatgaatgaaggatggctcatctccgccggt
gctgctaatgtccctaggccactattactgcgcattatcaaccttgcacgtgtgatcgaa
gttatatataagcatgaagatggattcactcatgctgaaactgggcttaaggatattata
acgtctctgcttgtcgaacctgtacctatataa
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