Rosa chinensis (China rose): 112178598
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Entry
112178598 CDS
T06020
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112178598
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112178598
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
112178598
NCBI-ProteinID:
XP_024172526
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Position
7:58151473..58156742
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AA seq
662 aa
AA seq
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MSWWQRFKSRVVSIGFNRQQESQTMSGAGVRLHNLGPHVVMDNGIVQVTLSNPDGIVTGI
RYNGIDNLLEPLNPEHNRGYWDLVWSGPGVKGTFDVIKGTTFRVIVENEEQVELSFTRTW
DPSLEGKYVPLNIDKRFVMLRGSSGFYSYAIYEHLKDWPDFEIGETRITFKLRKDKFQYM
AISDNRQRYMPLPDDRMPGRCQPLAYPEAVLLLNPKMQELAGEVDDKYQYSCVNKDNQVH
GWICTNPPVGFWQITPSDEFRSGGPLKQNLTSHVGPTTLAMFHSSHYAGQDLVPKFRGGE
PWKKVFGPVFIYLNSAGIRDDPFFLWEDAKIKMMAEVQSWPYSFPASEDFQKSDQRGNVS
GRLLVLDRYVSEEYIPANDAYVGLAPPGDVGSWQRECKDYQFWSRADNRGYFCINNICTG
TYNLYAWVPGFIGDYRYEAVINITSGSFTEMGDLVYEPPRDGPTLWEIGIPDRSAAEFYV
PDPDPKHINKLFVNHPDRFRQYGLWNRYTELYPHEDLVYTVGVSDYSKDWFFAQIPRQKD
NTHVGTTWQIKFKLNNVDRNSTYKLRVAIASATLAEMQVRINDPNARRPLFTTGLIGRDN
SVARHGVHGIYWLFNINVPGAQLVEGDNTIFLTQPRCTSPFQGLMYDYLRLEGPPTCGSS
SS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtggcagagattcaaatccagagttgtttcgataggtttcaatagacaacaa
gagtctcagaccatgtcaggagcaggagtgcggttacataatctgggtccccatgtggtt
atggataatggcatagtccaagtcaccttatcaaacccagatggtattgtcaccggaata
cgatataatgggattgacaatttgcttgaacctctcaatcctgaacataatagagggtat
tgggaccttgtctggagtggaccaggagttaagggaacatttgatgtgataaaaggtact
acttttagggttattgtggagaatgaggaacaggtcgagctctcatttacaagaacgtgg
gatccctctcttgaggggaaatatgttcccttaaacatagacaaaaggtttgtaatgctt
cgtggttcctcgggcttctactcctatgcaatttatgagcacctgaaggattggcctgat
tttgagattggtgaaaccagaataactttcaaactgagaaaagacaagttccaatacatg
gctatctcagacaacaggcaaagatacatgcccctacctgatgaccggatgccaggaaga
tgccagcccctggcttacccagaagctgtcctacttctgaatcccaagatgcaagagctt
gccggagaggtagatgacaagtaccagtactcatgtgtgaacaaagacaatcaagttcat
ggttggatatgcaccaacccaccagttggcttttggcagatcacaccaagtgatgaattc
cggtctggtggacctctgaaacagaatctaacctcacacgttggccccaccactcttgca
atgtttcatagttctcattatgcgggacaagatctggtgccaaaatttagaggtggtgaa
ccatggaagaaggtttttgggcctgtttttatctatctcaattctgcgggaattagagat
gatccgttctttttgtgggaggatgctaaaattaagatgatggcagaagtccaaagctgg
ccatatagttttccagcttctgaggatttccaaaagtcggatcaacggggtaatgtgagt
ggtagactacttgtcttggacaggtatgttagtgaagaatatataccagcaaatgatgca
tatgttggtttggctccaccaggagatgtaggatcatggcaacgagaatgcaaggactat
caattctggtcgagggcagataacagaggttacttttgcattaacaacatatgtactggc
acgtacaatctttatgcatgggtccctggttttattggagattaccggtatgaagcagtc
attaacataacctcaggttcttttactgaaatgggtgatcttgtgtatgaacctccaaga
gatgggcctacattgtgggaaataggcattcctgatcgttccgctgcagagttttatgtt
cctgatcccgatccgaagcatattaataagctttttgttaatcatcctgacaggttcagg
cagtatggtctgtggaacagatatactgaattatatcctcatgaagatttggtttatact
gttggtgttagtgattatagtaaagattggttctttgctcagattcccaggcaaaaggac
aacacacatgtaggaacaacatggcaaattaagttcaaacttaacaatgtggatcgaaac
agtacctataaactgcgagtggcaattgcatctgcaactctagctgaaatgcaggttcgt
atcaacgatccaaacgcaagacgacctctatttacgactggactgatagggagagataac
tcagttgcgagacatggagttcatgggatctactggctgttcaacatcaatgtaccgggt
gcccagcttgttgagggtgataatactatcttcctgacacaaccaagatgcaccagtcct
ttccaagggcttatgtatgattacttacgacttgaaggccccccaacttgtggttcgagt
tcgtcttaa
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