Rosa chinensis (China rose): 112178630
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Entry
112178630 CDS
T06020
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112178630
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112178630
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-GeneID:
112178630
NCBI-ProteinID:
XP_024172564
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All DBs
Position
7:2489256..2491222
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AA seq
439 aa
AA seq
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MAMEADHKLKLLLLCLLMTITIPALKANIGEFDEEWERRQEAAEKSAKAAYKPEPLHITT
HLNRQVHKTLEGLNDTRRSLRHHYDGPCQVTNPIDACWRCDPNWDQDRQKLADCALGFGH
ETTGGKGGRIYTVTDPSDDNVLEPEEGTLRWAVIQPEPLWIIFKDDMNIELKEELLVTSN
KTIDARGCNVHIQGGAQITLQYVQNIIICNLHVRDTVSKEGGMVRDSTGHFGLRTASDGD
GISLFGASNVWIDHVSASNCADGLIDVVAGSTAITISNSHFTDHNDVMLFGSSDSYYKDE
LMQITLAFNHFGQGLIQRMPRCRFGFFHVLNNDYTHWIMYAIGGSSHPTILSQGNRYIAP
ENAAAKEICNRVNTAKSEWSKWSWTSEGDLFLNGATFTESGSPIRNIPQEDMITAKPGTF
VTTLTMFAGPLKCDEGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagctgatcacaagctgaagctgctattattatgtcttctgatgacaata
acaattccggcattgaaggccaacatcggggaatttgatgaggagtgggagaggcgacag
gaagcagccgaaaagtctgcgaaagcggcctacaagcctgaacctctacatattacaacc
catttgaacagacaagtccacaagacactggagggtcttaacgacacaagaaggagcttg
agacaccattatgatggtccatgccaggttacaaacccaatcgacgcttgctggagatgc
gatccaaattgggatcaagatcggcagaagctagccgattgtgctcttggctttggacat
gagacaaccggaggcaaaggtggacgtatctataccgtcactgatcctagtgacgacaac
gtgctcgaaccagaagagggtacattgcggtgggctgtgattcaacctgaaccgctctgg
atcatatttaaagatgacatgaacatagaactgaaagaagagctcctggtcactagtaac
aagaccattgatgcaagggggtgtaatgtgcacattcagggtggtgcgcaaattactctg
cagtatgtgcagaacatcattatctgtaaccttcacgttcgtgacaccgtttccaaggaa
ggtggcatggttagggactcgacgggtcactttggactacgtacagccagcgatggtgat
ggaatatccttgtttggtgcctcaaacgtttggatagaccatgtttctgcctcaaattgc
gccgatggactcatcgatgttgttgcagggtctactgccattaccatatccaactctcac
ttcaccgatcataatgatgtgatgctgtttggttcaagcgatagctactataaggatgaa
cttatgcagataactctagctttcaaccatttcggacagggattgatacagaggatgcca
aggtgcagatttggttttttccatgttctgaacaatgactacactcactggattatgtat
gccatcggtggcagcagccatcctaccatactaagccagggaaatcgctacattgctcca
gaaaatgctgcagctaaagagatatgtaatagagtcaacacagcaaagagtgagtggagt
aaatggagttggacatcagaaggagatcttttcctgaatggagcgacttttactgaatct
ggaagcccgattcggaatatcccacaagaggatatgataactgcaaagcctgggacattc
gtaaccacgctcacaatgtttgccggtcctcttaaatgtgatgaaggcaagccatgttag
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