Rosa chinensis (China rose): 112178642
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Entry
112178642 CDS
T06020
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112178642
Membrane trafficking [BR:
rcn04131
]
Protein recycling
Others
EARP complex
112178642
Endosome - Golgi transport
Tethering complex
GARP complex
112178642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
Vps54_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
112178642
NCBI-ProteinID:
XP_024172577
LinkDB
All DBs
Position
7:67552252..67560796
Genome browser
AA seq
778 aa
AA seq
DB search
MEVEGVPLDDKAKRMRDLLSSFYSPDPSMSSPNSNSSSKYITLDAINTTSFDPDQYMNLL
VHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKQMKSNIVGMEANME
QLLDKIMSVQSRSDGVNTSLFEKREHIEKLHRTRNLLRKLQFIYDLPARLAKCIKSEAYA
DAVKFYTGAMPIFKAYGDSSFQDCKRASEEAVAIIIKNLQGKLFSDSESIQARAEAAVLL
KQLDFPVNSLKVKLLEKLEQSVADLQLNIEEVGNASVDSNHPSTDPAPATAHDASVREFA
EAIRAYRVIFPDSDNQLTRLAQDLVSRHFGTTEQYIKKQVWSADLLGVLRIIWKDVLLLE
DVLHEAALTNYSFEAAQISVKFYIANKFTHLQSEISDALKKVQIKQKNSGEDYSLQVALE
GGKKAVLQGSMNVLLDFRQLLDDDLGLLVKLRDFIIDWVQEGFQEFFRALDGHFLLLSGR
HSSASQDQGLTEGKLDDKVLAGLVLVLAQISLFIEQNAIPRITEEIGASFSDGGVRRYEN
GPAFVPGEICRIFRSASEKFLHLYIKMTTQRISVLQKRKFTATTWVKHKEPREVSMFVDL
FLHELEGIGREVKQILPEGLRRHRRADSTGSTASSRSNPLREEKLSRSNTQRARSQLLET
HLAKLFKQKIEIFTKVEFTQGSVLTTVVKLGLKSLQEFVRLQTFSRSGFQQVQLDIQFLR
TPLKEMAEDEAAIDFLLDEVVVATAERCLDPTPLEPPILDRLMLAKLVKTREQNLLSP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaaggtgtgcctctggacgacaaggcaaagagaatgagggatctgctatcg
agcttctactctccagatccttcaatgtcgtccccaaactccaattcatcttccaagtac
atcactctcgacgccatcaacaccacctccttcgatcccgatcagtacatgaatcttctc
gtacataagtcaaacttggaagggcttctacagagacatgttgaaatggctgctgagata
aagaatcttgacactgacttacaaatgttagtttatgagaactacaacaagtttatcagc
gcaacagatacaattaaacagatgaaaagtaatatcgtgggcatggaggcaaacatggaa
cagctgcttgataagataatgtccgtgcaatctaggagtgatggggtcaacacttctctt
tttgaaaagagagaacacatagagaaattgcatcgtacgcggaatcttcttcgtaagctt
cagttcatatacgatctacctgctagacttgcaaagtgtatcaaatcagaagcatatgct
gatgcagtcaaattctatactggtgcaatgccaatttttaaagcatatggagactcctcg
tttcaggattgtaagcgagcatctgaagaagctgtggccataattataaagaatttgcag
ggaaagcttttctcagattctgagtccatccaagcaagagctgaggctgctgtgcttctt
aagcaattggatttcccagtcaatagcttaaaggtgaaactccttgagaaattggaacaa
tctgttgccgacctgcagcttaacattgaagaggttggtaatgcttcagtggattcaaat
catccttctactgatccagctcctgctactgctcatgatgcttctgttcgtgagtttgcg
gaggctattcgtgcttatcgggtgatatttcctgattcggataaccaattaaccagactt
gcacaagacttggtatccaggcactttggaaccactgagcagtacataaagaaacaagtt
tggtcggcagatctactaggtgtccttcgaattatatggaaagatgtacttctattggaa
gatgtgctacatgaggctgctctaaccaattattcttttgaggctgcccaaatttctgtc
aaattctacattgccaacaaatttactcatctccaaagcgagatatcagatgccctcaaa
aaggtccaaattaaacaaaagaatagcggagaagattattccttgcaagttgccctcgag
ggcggaaaaaaggcagttctccaaggcagcatgaatgtcttactggacttccgccaactt
ttggacgatgatttgggcctactagttaaactgagagactttattattgattgggtccaa
gaagggtttcaggaattcttcagggcacttgatggtcacttcctcttgctatcaggcagg
catagttcagccagtcaagatcagggtttgacagagggaaaactagatgacaaagttctg
gcagggcttgtccttgtgctcgcccaaatttcgcttttcatagaacaaaatgctatccca
agaatcaccgaggaaataggtgcgtccttttctgatggtggtgtcagacgctatgaaaat
gggcctgcctttgttcctggagaaatctgtaggattttccggtcagctagtgaaaagttt
ctgcacctttacataaaaatgacaacccaaaggatatcagttctccaaaagagaaagttt
acagcaacaacttgggtcaagcacaaggaaccgcgagaagttagcatgtttgttgattta
tttcttcacgaattggaaggaatagggagagaggttaagcagattttacctgaaggcctc
cgaagacatcgtagggctgacagcactgggagtactgcctcatcacggagtaatccatta
cgtgaggagaaattgagtcggtcaaatacccaaagggcaaggagccagctattggaaacc
catctagcaaaattgttcaagcaaaaaattgaaatttttacgaaagtggaatttacacag
gggtcagttttaacaactgtggtaaaacttgggctaaaaagcttgcaagaatttgtcaga
ctccaaacttttagtcgaagtggattccagcaagttcagttggacattcagtttttgagg
actcctttaaaggaaatggcagaagatgaagctgccattgactttttgctagatgaggtg
gttgttgctactgcggagcgttgtcttgacccaactccattagagccccccatcttggac
agacttatgctagcaaagttggtaaaaaccagggaacagaatctactttctccatga
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