Rosa chinensis (China rose): 112178737
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Entry
112178737 CDS
T06020
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112178737
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
112178737
NCBI-ProteinID:
XP_024172709
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Position
7:complement(64326289..64331102)
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AA seq
672 aa
AA seq
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MSGGGCSVVWFRRDLRVEDNPALAAGVRAGGVVALFIWAPEEEGPFYPGRVSRWWLKHSL
AHLDSSLRSLGTPLITKRSTDSVSSLLEVCLATGATQLFFNHLYDPISLVRDHRAKEVLS
ANGITVRSFNADLLYEPWDVNDVHGRPFTTFDAFWERCLSMPYDPDAPLLPPKRIVSGDA
SRCPSDTLIFEDESEKGSNALLARAWSPGWSTADKAVTTFINGPLIEYSKNRRKADSNTT
SLLSPHLHFGEVSVRKVFHLIRIKQLLWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVINQNYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEA
LTEMWQHERAAVENGTEEGLGESSESTPIAFPQDIQMEDSHEQVRNNPPPPTRRYEDQMV
PSITTSLVRVEEEESSVDLPSRAEVPTNVTGDQESRRDTLNQEGFQPNHNNTPPQPNTAL
TLQFVVEDSSAESSSSTRRERDGGVVPVWSPSTSSYSEQFVSDENGIATSSYLQRHPQSH
QIMNWRRLSQTG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgcagtgtagtatggttcaggagagatctgagggttgaggacaat
ccagctttggcagctggagttagagcaggaggagttgttgctctctttatttgggcacct
gaggaagaagggcctttttacccaggaagggtctcaaggtggtggctcaaacacagcttg
gcccatcttgattcctctttgagaagtttgggcactcctctcatcaccaagagatctact
gatagtgtttcttctcttcttgaggtttgtcttgcaactggtgccactcagctcttcttc
aaccacttatatgatcctatatcactggttagagatcacagggccaaggaggttttgtct
gccaacggcataaccgtgcgttcctttaatgctgatttgctctatgaaccgtgggatgtt
aatgatgtccacggtcgcccattcacaacctttgatgctttttgggaaagatgccttagc
atgccatatgatccagatgcaccacttcttcccccaaagagaattgtttcaggtgatgca
tcaaggtgtccttctgatacattgattttcgaagatgaatcagagaagggaagcaatgcg
ttacttgctcgagcatggtcacctgggtggagcactgctgataaggctgttaccacattt
attaatggtccattgattgagtattccaaaaaccgcagaaaggctgatagtaatacaact
tctctgctttctccccatttgcattttggggaggtaagtgtgaggaaagtatttcatctt
attcggatcaagcagttgctttgggccaatgaaggtaacaaggctggtgaagagagtgtg
aacttgtttctgaaatctattggtcttagggagtattcaagatacattagtttcaatcat
ccttacagtcacgaaagacctcttcttgggcacctaaaattcttcccctgggttataaat
cagaactatttcaaggcatggaggcaaggtcgaactggctatccgttggtggatgctggc
atgagagagttgtgggctactggctggctgcatgatcggatacgagttgtagtttctagt
ttctttgtaaaggttctccagcttccatggaggtggggaatgaagtatttctgggataca
ctcttagatgctgatcttgaaagtgatgctcttggttggcagtatatatctggcactatc
cctgatgggcgtgagtttgaccgcatagataatccacagtttgagggttacaagtttgat
ccacatggagaatatgtgcgacgatggcttcctgaacttgccaggctaccaactgactgg
atacaccacccatggaatgcgccagaatctgtactccaggcagctggaattgaactagga
tcaaattatcctcttcctattgtaggaatagatgcagcaaaaaccaggttgcaagaagca
ttaacagaaatgtggcagcatgaaagagcagctgttgagaatggaactgaagaaggtctc
ggagagtcttctgaatcaacccccattgcctttcctcaagacatacaaatggaggatagt
catgaacaggtgaggaataaccctccccctccaactcgacgctatgaggatcagatggtc
cctagtataactacttctcttgtgcgagttgaagaggaagaaagttctgtagatcttccg
agcagagcggaagtgcctacaaatgttactggggatcaagaatcaaggagagacacatta
aaccaagagggttttcagcctaatcataacaacactccaccacaacccaatactgcccta
accctgcaatttgttgttgaagattccagtgcagaatcttccagcagtactaggagagag
agggatggaggtgtagttccagtttggtctccttcaacttctagctactcggagcagttt
gtgagtgatgagaatggcattgcaacaagttcttacttgcaaagacatcctcagtctcac
caaataatgaattggaggcggctatcacaaactgggtaa
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