Rosa chinensis (China rose): 112178993
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Entry
112178993 CDS
T06020
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112178993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112178993
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
112178993
Prokaryotic type
Archaeal type
TFE
112178993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
GntR
DnaD_N
Dimerisation
Rrf2
Rio2_N
Zn_ribbon_8
Prok-RING_2
Motif
Other DBs
NCBI-GeneID:
112178993
NCBI-ProteinID:
XP_024173047
LinkDB
All DBs
Position
7:complement(5052328..5056061)
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AA seq
371 aa
AA seq
DB search
MSIEVFNRFVRLAARAFYDDVTPESDNKQPKTGRSDNRGIAVVVIDALSRRQWVREEDLA
KDLKLHPKQLRRVLQMLMEEKLVIREHRKETAKGVKIFSAAVAATANGQQHRKEGEEKIK
LQTHSYCCLDYAQIYDVVRYRLHLLKKELKDELEGKHAVEEYVCHNCRKRYNALDALQLV
SMEDEYFHCESCNGILVAESDKLDSQTTAGRDCKAMLQNMEVQLKPLMEQINRVKDLPFP
EFGSLQAWEARASAPRLAENSESSAIDPSISSHGLGYGGTPMPYVGDTKVEVVFSKNEDK
GKDIKSQADNTDLKVIPPWMIKQEMTLTREQCGEVRQMESSQMHISSHQVRRVGMKSERD
EDEGDDNIDWE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaggttttcaacaggtttgtgaggcttgcggccagagcgttctacgatgac
gtcacgccggaaagtgataataagcagcccaagactggccggagcgacaataggggaatc
gccgtcgtggtgatcgacgcgctatcaaggcgacaatgggtgagagaagaagatctggcg
aaggacctgaaactgcaccccaagcaacttcgtcgtgttttgcaaatgttgatggaggaa
aagttggtgatcagagaacataggaaagagacagctaagggtgtgaagattttcagtgct
gcggttgctgccacagccaatgggcaacaacacagaaaagaaggcgaagagaaaattaag
ctgcagactcactcttactgctgtctggactatgctcagatatatgatgtagtaaggtac
agactgcaccttttgaagaaagaactgaaagatgaactggaggggaagcacgcagtggag
gaatatgtatgccataactgcaggaaaagatacaacgcattggatgcactgcaactggtt
tctatggaggatgaatacttccactgcgaaagttgcaatgggatacttgtggctgagagt
gacaagctagattctcaaaccacagcaggccgagactgcaaagcaatgctccaaaatatg
gaggtacagctgaagcctttaatggaacaaattaatagagttaaagatttaccatttcct
gaatttggaagtctccaagcttgggaagccagagcaagtgctccacgacttgcagagaat
agtgaatctagtgccattgatccctccatatcttctcatgggctggggtatggtgggacg
cccatgccttacgttggagatacaaaggttgaagttgtgttttctaagaatgaggacaag
ggtaaggatataaaatctcaagctgataatacagacctaaaagttataccaccttggatg
atcaagcaagagatgactcttacaagggaacagtgtggagaggtcaggcaaatggaatcc
tcacaaatgcacatctctagtcatcaggttcgtcgggttggcatgaagtcagaacgggat
gaggatgaaggagatgataatattgactgggaataa
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integrated database retrieval system
