Rosa chinensis (China rose): 112178999
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Entry
112178999 CDS
T06020
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112178999
Enzymes [BR:
rcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
112178999
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
112178999
Prokaryotic type
112178999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
112178999
NCBI-ProteinID:
XP_024173053
LinkDB
All DBs
Position
7:18952540..18959316
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AA seq
481 aa
AA seq
DB search
MAANTASVQPGRFRVLKQGAKPVDPNPGPVVYWMFRDQRVKDNWALIHAVEEANKAHVPV
AVAFNLFDQFLGAKARHLGFMLRGLRQLHPDLQEAHQIPFFLVRGEAEETIPNFMRECGA
SLLVTDFSPLREVQKCKEEIRKRVSDFVTIHEVDAHNVVPVWAASEKLEYSARTIRSKIN
KRLPEYLIEFPTLQPPIAKWVGTSPAIDWDGLIDEVLRKGAEVPEVDWCEPGEKAAMEVL
KGSKNGFLTKRLKGYSSDRNNPLKPRGVSGLSPYLHFGQISAQRCALEARSVRKLSPLAV
DAFLEELIVRRELADNYCFYQPQYDSLQGAWEWARKTLMDHASDKREHIYTREQLEKAQT
ADPLWNASQCEMVHYGKMHGFLRMYWAKKILEWTRGPEEALEISIYLNNKYEMDGRDPNG
YVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDGYVAYVQRLGATKKRKLLLS
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaacaccgcctccgtccaaccgggtcgctttcgggtcctaaagcaaggggcc
aaaccggtcgatccgaatccgggtccggtggtttactggatgttcagagaccaacgggtc
aaagacaactgggcgttgatccacgccgttgaagaggccaacaaggcccatgtccccgtc
gccgtggccttcaatttgtttgatcagtttcttggcgccaaagcccgccatttagggttt
atgctgaggggcttgcgacaattgcatcctgatcttcaagaagcgcatcagattccattt
tttcttgtccggggagaagcggaggagactatacccaattttatgagggagtgtggggct
tcacttttggtaacagacttctcacctttaagggaggtgcagaaatgtaaagaggaaata
cgcaagagggttagtgattttgtgaccatacatgaagttgatgcccacaatgtggtgccc
gtttgggcggcatcggagaagttggagtatagtgctaggactataaggagtaagatcaat
aaaaggctgcctgagtaccttattgagtttcctacattgcagccaccgattgcaaaatgg
gtgggtacaagtccggcgattgattgggatggtcttattgatgaagttttaaggaaagga
gcagaagttcctgaagttgactggtgcgaaccaggagaaaaggcagcaatggaagttttg
aagggtagcaaaaatggattcttgacaaaaaggctgaagggttattcatcggaccggaat
aaccctttgaaaccaagaggggtgtctggtctttctccatatttgcattttgggcaaata
tctgctcagaggtgtgccttggaggcacgcagtgtccgaaaactcagtcccctggcagtg
gatgcatttttagaggagttgattgtgcgcagagaacttgctgacaactactgcttttac
cagcctcaatatgattcattgcaaggggcatgggaatgggcacgtaagaccttaatggac
catgcttcggataagcgagaacatatttacacgagggagcaattggagaaggcacaaact
gctgatcctctctggaatgcctcccaatgtgagatggttcattacgggaagatgcatggt
tttctgcggatgtattgggcaaaaaagatccttgagtggacaagaggacccgaagaagcc
cttgaaatatccatatatttaaataacaagtatgaaatggatggaagggatcccaatgga
tatgttggttgcatgtggtcaatatgtggtgttcacgaccagggttggaaggaacgacca
atttttgggaaaatacgttacatgaactatgcaggctgcaaaaggaaatttgacgtggat
ggatacgttgcctatgtgcagaggcttggtgcaaccaagaagagaaaactcctactcagt
gaatag
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