Rosa chinensis (China rose): 112179019
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Entry
112179019 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112179019
04121 Ubiquitin system [BR:
rcn04121
]
112179019
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112179019
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112179019
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112179019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-HC5HC2H
Rad50_zn_hook
Anti-TRAP
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112179019
NCBI-ProteinID:
XP_024173085
LinkDB
All DBs
Position
7:complement(295862..300115)
Genome browser
AA seq
374 aa
AA seq
DB search
MSSSGGNSGIAPSQLYFCHQCDRTVSLNPSPTSDLNCPICSDGFLEEMETSNPNPSPNPF
FSFPSDAPPFASSSGFPSFLFSTPAGPAAGGPGNLGDELSAFLGGGAPSSRSSPFQDPDA
FDPFVFLQNYLQTLRANGANVQFVIDNSGGGGGGGVGDPSAFRVPTNLNFGDYFFGPGLE
QLIQQLAENDPNRYGTPPASKSAIEALPVVKISKELLDSDSSQCAVCKDSFELGEEAKQM
PCKHLYHSDCILPWLELHNSCPVCRHELPTDDSEYEQRIRGGDAANANTTQSSAAANNSS
GVGGSRGPAVDIQSQAPRTVERRFTISLPRIFRVFGGAPETSNTGSASGNNDGPNSGNRG
SHNSESEPRQEDLD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgggcggcaactccggcatcgccccctctcagctgtacttttgccaccag
tgcgatcgcaccgtttccctcaacccttcccctacctccgatctcaattgccctatttgc
agtgacggcttcctcgaagagatggaaacctctaaccctaacccttcccccaatcccttc
ttctccttcccctccgacgcccctcccttcgcctcctccagcggttttccctcctttctc
ttcagcaccccagcaggccccgccgccggtggtccgggaaatcttggcgacgaactctcc
gccttcctcggtggtggcgcgccttcctcccgctcgtccccctttcaggaccccgacgcc
ttcgacccctttgtgttcctccagaactatttgcaaaccctaagggccaatggtgccaat
gttcagtttgtgattgataacagcggcggaggaggaggaggaggagtaggggatccttca
gccttccgtgttcccaccaatcttaattttggagattacttcttcggcccaggcctcgag
caactcatccagcagcttgccgagaatgatccaaaccgctacggcacgccaccggcttca
aagtctgccatcgaggccttgccagttgtgaaaatctcaaaggaactcttggattctgat
tcttctcagtgcgcagtgtgtaaggactcgtttgagcttggggaggaggccaagcagatg
ccctgcaagcacttataccattctgattgtattcttccctggttggaattgcataactca
tgccctgtttgtcgccacgagttgccaaccgatgattcagagtatgagcagaggattcgt
ggcggcgatgcagccaatgcaaatacaactcaatcttctgctgctgccaacaattccagt
ggtgttggtgggagtagggggccagctgttgacattcagagtcaggcaccacgtacagtt
gagcggaggttcaccatttccttgcctcgcatttttagggtatttggtggtgcacccgag
actagtaatactgggagtgcaagtggaaacaatgatgggcctaactcagggaatagggga
agccataactcggaatctgagcccagacaagaagatcttgattga
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