Rosa chinensis (China rose): 112179086
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Entry
112179086 CDS
T06020
Name
(RefSeq) ABC transporter F family member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcn03012
]
112179086
Translation factors [BR:
rcn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112179086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA
AAA_15
NACHT
AAA_29
AAA_22
AAA_28
AAA_16
nSTAND3
ORC-CDC6-like
DUF5906
AAA_23
RsgA_GTPase
AAA_25
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
112179086
NCBI-ProteinID:
XP_024173176
LinkDB
All DBs
Position
7:6292648..6299039
Genome browser
AA seq
712 aa
AA seq
DB search
MTTVASSLVHDVLGRRADDVDRPIIDYIINVLADEDFDFGDDGEGAFDALGELLVAAECV
ADFDECRSVCSTLTEKFGKHGLVKTKPTVRSLAAPVRMDDGMDEGEAPKKKQELIDGPVL
TERDRAKLDRRKRKDERQREQQYQMHLAEMEAARAGMPVVTVNHDGGGGANVKDLHLEGF
NVSVGGRDLIVDGAVTLSFGRHYGLIGRNGTGKTTFLRHLAMHAIDGIPNSCQILHVEQE
VAGDDTSALQCVVNTDIERSQLLEEEARLLAQQRELELEEEGGKSNGEIDKDAIGLRLQE
VYKRLEFIDADSAESRAASILAGLSFSPEMQRKATKTFSGGWRMRIALARALFIEPDLLL
LDEPTNHLDLHAVLWLEAYLVKWPKTCIIVSHAREFLNSVVTDILHLHGQKLTAYKGDYD
TYERTRVEQLKNQQKAFESNERSRNHMQAFIDKFRYNAKRAALVQSRIKALDRLGHVDEI
VNDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIG
KSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLTSNPLLYMMRCFPGVPEQKL
RSHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALI
QGLVIFQGGILMVSHDEHLISGSVDELWVVSEGKIAPFHGTFQDYKKILQSH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtggcgagctcattggtccacgacgttctcggccggagagccgacgacgtc
gaccgacctataatcgactacatcatcaacgtcctcgccgacgaggacttcgatttcggc
gacgacggagaaggcgccttcgacgctctcggcgagctcctcgtcgctgctgaatgcgtc
gctgactttgatgagtgccgctcggtttgcagtacgttaaccgaaaagtttgggaagcat
ggtttggttaaaaccaaaccaaccgtgcggagtcttgcggcgccagtgagaatggatgat
ggaatggatgagggggaagcaccgaagaagaagcaggagttgattgatggcccggtgctg
actgaacgtgatcgggcgaagctagataggcgaaagaggaaggatgagcgccaaagagag
caacaatatcaaatgcatttagcagaaatggaagcagctagggcaggaatgcctgttgtc
actgtaaatcatgatggtggtggtggcgcgaatgtcaaggatctccatctggaaggcttc
aatgtctctgtgggtggacgtgatctaattgtggatggtgcagtaacactttcttttgga
aggcattatggacttattggaagaaatggtactggaaaaactacgtttcttaggcacttg
gctatgcatgccattgatggcattcctaacagctgccaaatattgcacgtggagcaagaa
gtggcaggtgatgatacatcagccttgcaatgtgttgttaacaccgatatcgaaagaagc
cagcttttggaagaagaagctcgtctccttgctcaacagagagaactggagctggaggaa
gaagggggaaagagcaatggagaaattgataaagatgccattggactgaggcttcaggag
gtatacaagaggcttgagttcatcgatgctgattctgcagagtcacgtgcagcttccatt
cttgcgggtcttagtttctctcctgagatgcagcgaaaagcaactaaaacattttctgga
ggatggagaatgagaatagctcttgctcgtgccctctttattgagcctgacttgttactg
cttgatgaacctacaaaccatcttgatctccatgctgtcctttggctagaggcttacctg
gtgaagtggccaaaaacatgtatcattgtttctcatgctagagaattcttgaactcggtg
gtaactgatatccttcatcttcatgggcaaaagttgactgcttacaaaggtgactatgat
acatatgagaggacaagagtggaacagctcaagaaccaacagaaagcatttgaatctaac
gagcgttcaagaaatcatatgcaggctttcatcgataagtttcgctataatgccaagagg
gccgctctcgtgcaatcaagaattaaggcattggaccggttgggacatgtggatgaaatt
gtaaatgaccctgactataaatttgaattcccaactccagacgacagacctggtgctcct
ataataagtttcagtgatgcatcatttggttatcctggtggaccccttttgtttaagaat
ttaaattttggaattgacctagacagccgcattgcaatggttgggccaaatggcattggg
aaatcaactatattgaagctaattgcaggagagctgcaaccaacctctgggacagttttc
cggtcagctaaggttcgtattgctgttttcagtcagcatcacgttgacgggctagatcta
acttccaatcctctgttgtacatgatgcggtgctttccaggagtgcctgaacagaagctc
cgatctcacttgggttcttttggtgtaactggaaatctcgcactgcagccaatgtacact
ctgtctggtggtcagaagagcagagttgcatttgcaaagataactttcaagaagccacac
ataatattgctcgatgagccctccaatcatctggatctggatgctgtggaggcattgatt
caaggtcttgttatcttccaaggaggcattctcatggttagtcacgacgagcatctgatc
tctgggagtgtggatgagctgtgggtggtatctgaaggcaagatagcaccattccatggc
actttccaggactacaagaagatactgcagtcacattaa
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