Rosa chinensis (China rose): 112179094
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Entry
112179094 CDS
T06020
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112179094
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
112179094
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
112179094
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_1
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
112179094
NCBI-ProteinID:
XP_024173188
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All DBs
Position
7:10021665..10024956
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AA seq
567 aa
AA seq
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MATAVVAAPADPIRKQPRPGRGGFEAHGLSEEEARVRAIAEIVGSMVDLSRRGQNVDLNA
LKTAACRKYGLARAPKLVEMIAALPESDREALLPKLKAKPVRTASGIAVVAVMSKPHRCP
HIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARGRIDQLKRLGH
SVDKVEYILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTI
ETRPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK
VVAHMMPDLPNVGVERDMESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNY
PPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRD
VRTREAGIQDIHHQIKPDEVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNT
TSPELMGKCSIVRELHVYGTAVPVHGRDAGKLQHQGYGTLLMEEAERIATREHRSTKIAV
ISGVGTRHYYRKLGYELEGPYMVKHLV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcggtggtggcggcgccagccgatcccatccgtaagcaaccccggccgggc
cggggcgggttcgaagcccacggactatccgaagaagaggcccgcgtccgggcaatagcc
gaaatcgttggctccatggtcgacctctcccggcgaggccaaaacgtcgacctaaacgcg
ctcaaaaccgccgcttgccgcaagtacggcctcgcacgtgcgccgaagctggtggagatg
atcgccgcgcttccggaatcggaccgcgaggctctgctcccgaagctgaaagccaagccg
gtccgaaccgcctcgggaatcgccgtcgtggccgtgatgtcgaagcctcaccggtgccct
cacatcgccaccacggggaatatatgcgtgtactgccccggtgggcccgactcggatttt
gagtatagtactcagtcttatactggatacgagccaactagcatgcgcgcaattcgagcc
aggtacaacccgtatgttcaggctagaggcaggatagatcagctgaagcgattgggtcat
agtgtagacaaggttgagtacatcttaatgggtggtacattcatgtcattgccagcagat
taccgtgattactttattagaaatcttcatgacgcattatctggccacacttctgccaat
gttgaagaggcagtagcctactcggagcatggggctactaaatgtattgggatgaccatt
gaaacgaggccagattactgccttggacctcacttgagacaaatgcttacttatggttgt
acacggttggagattggagttcagagtacatatgaagatgtggctcgtgacactaataga
ggtcatacagtagctgcagtggctgattgtttctgcttggcaaaggatgctggtttcaag
gttgttgcacacatgatgcctgatctcccaaatgtaggggttgagagagacatggaaagt
tttcgggagttttttgagagccccctgttcagagcagatggacttaaaatttatccaaca
cttgtaatccgtgggactggactttatgagctctggaaaactggaaggtatagaaattac
ccacccgagcaacttgtggacattgtagccaggatcctggccatggtacccccttggaca
cgtgtttatagagttcagcgggacattccaatgcctctagttacttctggggtggagaaa
ggaaatcttcgggagctagctttagctcggatggaagacttgggcttaaagtgtcgtgat
gttcgaacacgagaagctggaattcaggacatacatcaccaaattaagccggatgaagtg
gaactcgttcgtcgtgattatacagcaaatgaaggttgggaaacatttctttcatatgaa
gatacacgccaggatattctagttgggttgttgcgattaagaaaatgtggcaaaaacact
acctctcctgaacttatggggaagtgttctattgttcgtgaactccatgtttatggaact
gctgttccagttcatgggcgggatgctggcaagctgcaacaccagggctatggtaccctg
ttgatggaagaagccgagcgaattgctacaagggagcacagatcaacaaaaattgctgtt
atttcaggagtaggaactcgtcactactatagaaaattaggatatgagcttgaaggacct
tacatggttaaacatcttgtataa
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