Rosa chinensis (China rose): 112179299 Help Entry 112179299         CDS       T06020                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism rcn  Rosa chinensis (China rose) Pathway rcn04120   Ubiquitin mediated proteolysis rcn04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:rcn00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112179299  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     112179299  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rcn04121]     112179299 Enzymes [BR:rcn01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      112179299 Ubiquitin system [BR:rcn04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     112179299   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      112179299 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd zf-C3HC4_2 Beta-prop_WDR19_1st Beta-prop_DCAF4 EIF3I zf-C3HC4 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_HPS5 WD40_RFWD3 zf-C3HC4_3 Beta-prop_CAF1B_HIR1 WD40_like zf-RING_2 Beta-prop_WDR75_1st zf-RING_UBOX Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 zf-C3HC4_4 Beta-prop_IFT140_1st Beta-prop_IFT122_1st zf-RING_5 U-box Prok-RING_4 zf-Nse DUF1664 Motif Other DBs NCBI-GeneID:  112179299 NCBI-ProteinID:  XP_024173448 LinkDB All DBs Position 7:28005649..28013409 Genome browser AA seq 662 aa AA seqDB search MEECSTGALVPAVKVEPILSSIGGSVDPCSSDLGRLTEEKGMSEVDKDLLCPICMQIVKD AFLTACGHSFCYMCIITHLSNKSDCPCCAQSLSKNQLFPNFLLDKLLKKTSAQQISKSAP PVEHFRQALQQGCEVSIKELDTLLALLAEKKRKMEQEEAERNMQILLDFLNCLRKQKVQE LNEVQSHLQFLKEDISVVERRRMELYRARDRYSVRQRMLGGDDSVNGARNSWPSSIDNNT SALRVRGGTSSWNIQGRGLQRNDALSASDSQYVNQSGLAVARKKRVHALFDELQECYLQK RRQMNQPYSQLERDRTVIPREGYSTGLADFQSVLTTLTRYSRMRVIAELRHEDLFHSANI VSSIEFDRDYELFATAGVSKCIKVFDFSSVVNDPADMHTAVVEMPTRSKLSCLSWNKFTK NHIASTDYEGIVTVWDVDTRQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVKVWCT RQEASVLNIDMKANICCVKYNPGSSNCIAVGSADHHIHYYDLRNVSQPLHVFTGHRKAVS YVKFLSNYELASASTDSTLRLWNVKDNIPVRTFKGHTNEKNFVGLTVNSEYIACGSETNE VFVYHKEISKPVTWHRFGSPDMEDTEDDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVL AA NT seq 1989 nt NT seq  +upstreamnt  +downstreamnt atggaggagtgttcaactggggctctagtcccggcagtgaaagtggaaccaattctatca agcatcgggggttcggtggatccatgcagcagtgacttgggtcgtctgacggaggagaaa ggaatgtcagaggtggacaaggatttgctgtgtccaatttgcatgcagattgtaaaggac gcattcctcacagcgtgcggccatagcttctgctatatgtgtatcatcacccaccttagc aacaagagtgactgcccttgctgtgcccaatctctcagcaaaaaccaactattccccaat ttcttactggacaagcttctgaagaagacttcagctcaacagatttcaaaaagcgcaccc cctgtggaacattttcgtcaggcattgcagcagggatgtgaagtgtccatcaaggagcta gacaccctattggcactccttgcagagaagaagaggaaaatggaacaagaagaagccgag agaaatatgcaaatattgcttgacttcttgaattgcctaaggaagcagaaagttcaagag cttaatgaggtacagtcccatcttcaatttctcaaagaggacataagtgtagttgagaga cgcagaatggagttgtaccgtgccagggataggtactctgtgaggcagcggatgcttgga ggggatgattctgtcaatggtgcaagaaattcatggccttcctctatagacaacaacacc agtgctctcagagtacgaggaggaacgtcctcttggaatattcagggacgaggactgcag agaaatgatgctttaagtgcatcagactcccagtatgtgaatcaatcaggacttgctgtt gccaggaaaaagcgggtccatgcattgttcgatgagctacaagagtgttacctgcaaaag cgacgtcagatgaaccaaccatattcccagctagaacgggacagaactgtaatacccaga gaaggttatagtacaggtcttgccgattttcagtcagtgcttactacgttaacgcgctac agtcgaatgagggtcattgctgaacttaggcatgaggatctatttcactcggccaatata gtatcaagcatcgaatttgaccgtgattatgagttgttcgccactgctggagtttcaaag tgcataaaagtttttgacttttcctcggttgtgaatgatccagctgatatgcacactgct gttgttgagatgcctacacgatcaaagctaagttgcttgagctggaacaagtttactaaa aaccatatagctagtactgattatgagggaatagtaactgtctgggacgtagatactcgg cagagtgtcatggaatatgaagagcatgaaaaacgtgcttggagtgttgatttttcatgc acagaaccctcgatgcttgtatccggtagtgatgattgtaaggtaaaggtttggtgcaca aggcaggaagctagtgttcttaacattgacatgaaagcaaacatatgttgcgtgaagtat aatcctggatctagcaactgcattgcggttggttcggcagatcatcacattcactattat gatttaagaaatgtgagtcaaccactgcatgtgtttactgggcacaggaaagcagtttcc tatgtgaaattcttgtcaaactatgagcttgcgtctgcatctactgatagcacgttgcgg ttatggaatgtgaaggataatattccagttcgtacttttaaaggtcacacaaatgagaag aacttcgtaggtcttacggtaaacagtgaatacatcgcatgtggcagcgaaacaaatgaa gtgttcgtgtatcataaggaaatttctaaacctgtgacttggcacagatttgggtcacct gatatggaagacaccgaagatgatgcagggtcttacttcatcagtgctgtgtgttggaag agtgatagccctacaatgctaactgctaacagtcagggaaccattaaggtcctcgttctt gcagcttaa

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