KEGG   Rosa chinensis (China rose): 112179361
Entry
112179361         CDS       T06020                                 
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcn03036]
    112179361
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    112179361
SSDB
Motif
Pfam: Mcl1_mid WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WDR55 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Ctf4_C Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd eIF2A WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_ELP1_1st PEP5_VPS11_N WDR54 Histone_HNS_N
Other DBs
NCBI-GeneID: 112179361
NCBI-ProteinID: XP_024173526
LinkDB
Position
7:4628868..4633772
AA seq 964 aa
MKVRQVKLREIHKSASSAGKPSFCSVVWDQQGFHSVTASSSDSSIAVHNALLSTCPPKLL
RNHRDGVTALAMSPNATCLASGSVDHSVKLYKFPSGEFETNITRFTLPIRALAFNKSGTL
LAAAGDDDGIKLINTVDGTISKVLKAHKGPVTGLGFDPQSEYMASIDSTGTVVYWELQSG
STLHTLKGVAPNSGLDLSVLNVLSWSPDGRMLAVPGVRNDVVVYDKDTAEKLFTLRGEHT
QSICALAWSPNGKYLATSGLDKQVLIWDVDRKQDIGRHKFDERITCLAWKPIDNVLAVID
CMGRYGVWEAVIPSSMKSPTEDVPNQSNNGLLLFDEDEDEGQEISTSGSLSDLGEDTYEE
SKPPSRKRLSKQSDSLRDLNEDDNDDFGLSPKVESHKKARRNHSESTDNGNEGLRSRLSS
ARPKMQEAFQPGATPVQPGKRRFLCYNMLGAITTIEYDGYSHIEIDFHDTSRGPRVPSMT
DHFGFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRLEGEEVKVVALGT
TWVAAITSLNLIRIFTIGGLQRHVLSLDGPVVTASGFMDELAIVTHASDSLPSNEQVLEF
RVLNINNSSQPLRGRLPLTPGSSLTWFGFSEEGKLSSYDSKGVLRVFTSEYGGSWFPLFS
ASKDKKSDENYWVIGLNARQLFCIVCKSPELYPQVLPKPVLTLLNFSIPLASSDLGAEAL
ENAFILNDMHLVQIQKQIEEMDAVGLDTSSLDDEAFKLETAQDQCILRLIGSCCHGDKLV
RATELVKHLSLEKSVRGAIKIVTSLKLPNLAERFNSILEERLLNDSKEPLQTTVPNPNYN
ASTSTEKSKLSGNDIPLPAPKLSAPSFLKKAKTQEANVGTAKTQEKQTDLEKSTTTERET
AGAEVNNAAGDMKKVGEMPKAQQSPRPSNPFLKRSNSQDIEKKEEVDQVKAHRPSNPFFK
KSVK
NT seq 2895 nt   +upstreamnt  +downstreamnt
atgaaggtccggcaagtgaagctccgcgagatccacaaatcggcgagcagcgccggaaag
ccgtccttctgctccgtcgtgtgggaccagcaaggcttccattccgtcaccgcctcctcc
tccgactcctcgatcgccgtccacaacgctcttctctccacatgtccgccgaagctcctc
cgcaaccaccgcgacggcgtcacggcgctcgctatgagccccaacgccacctgcctcgcc
tccggctccgtcgaccactccgtcaagctctacaagtttcctagtggagagtttgagact
aatattaccagattcacgctgccaatacgtgcccttgcctttaataagtcagggacactc
ttggccgctgctggtgatgatgatggcattaaacttattaacacagtggatggtacaatc
tcgaaggttctcaaagcacacaaaggacctgtaaccggcttaggttttgatccccaaagt
gaatacatggcatccatcgattcaactgggactgtagtatattgggaactccaatctgga
agcacattgcacacccttaaaggcgtagctcctaactctggtttagacctttctgtattg
aatgtactgagctggagtcctgatggacggatgttagctgttccgggagtgagaaatgat
gttgtggtgtatgataaagacactgctgagaagctctttacattgagaggtgaacataca
cagtctatttgtgccttggcttggtcacctaatggaaaatacttggctacctctggcttg
gataagcaggttctcatctgggatgttgatcggaagcaggatattggcagacataaattt
gatgagaggataacttgcttggcgtggaagccaattgacaatgtcctagctgtaattgat
tgtatgggcaggtatggtgtgtgggaagcagtgattccttcatcaatgaaatctcccact
gaagatgttccgaatcaatctaataatggtctacttttgtttgatgaagacgaagacgag
ggtcaggagattagtacatctggtagtttaagtgatcttggtgaagatacatatgaggag
tctaagccacctagccggaaaagactaagcaagcagtctgactctctgagagatttaaat
gaggatgataatgatgactttggtctgtcccctaaagttgaatcccataaaaaagcacgt
cggaatcatagtgaaagcactgacaatgggaatgagggattaagaagcagactgtcatct
gccaggccaaaaatgcaggaggcatttcagccaggggccactcctgtgcagcctggaaaa
aggcgctttttgtgctacaacatgcttggagctataactacgattgaatacgatgggtac
tcccatattgagatagattttcatgatacaagccgaggtccacgagttccatcaatgaca
gaccattttggttttacaatggcttcactgaatgagaatggaagtgtttttgcaaatccc
tgcaagggtgaaaagaacatgagcactctcatgtatcgcccatttagtagctgggcaaac
aatagcgagtggtctatgcgattggaaggggaagaagtgaaggttgtggcacttggtaca
acttgggtggcagcaattactagtcttaacttgatccgcatcttcaccattggtggtttg
cagagacatgttctctccctcgatggacctgtggtgactgcatcaggcttcatggatgag
cttgccattgtcactcatgcttcagacagtcttccctcaaatgaacaggtgcttgaattt
agggtacttaacataaataatagtagccagcctcttagaggacgtctgcctctgactcct
ggttcaagtttaacatggtttggctttagtgaagaagggaaattaagctcctatgactcc
aagggtgtgctgagagtttttacaagtgaatatggtggcagttggttcccgctcttcagt
gctagtaaagacaagaagtcagatgaaaactattgggtgatcggtttgaatgcaagacaa
ctattttgtatagtttgcaaaagccccgagttatatccacaggtgttgcccaaaccagtg
ctcactctactaaatttttcaattcctcttgcatcctctgatctaggagcagaagccctt
gaaaatgcatttatactaaacgacatgcatctcgtacagattcaaaagcaaatagaagaa
atggatgctgtaggtttagacaccagttcacttgatgatgaagcttttaaattggaaaca
gctcaagatcaatgtatattgaggcttattggatcctgctgccatggagataagcttgtg
agggctactgaacttgtgaagcatctatccctggaaaaatcagttaggggtgcaattaag
attgttacttctctgaagctacctaacttggctgaaaggttcaatagcatattggaggaa
aggttgctcaacgatagtaaagaaccattgcaaacaactgtcccaaacccaaactacaat
gcatcaacctctaccgagaaaagtaagttatcagggaatgatattccattaccagcacca
aaattgtcagctccttcgtttctaaagaaagccaaaacacaagaagctaatgttggaaca
gcgaaaacacaagaaaaacaaactgatcttgagaagtcgacgacgactgagagggaaact
gctggtgcagaggtgaataatgcagcaggtgacatgaagaaggtaggggaaatgcccaag
gcacaacagtcacctcgcccatctaatccatttctaaagcgatcaaacagtcaagacata
gagaagaaggaagaagtagatcaggtgaaagctcaccgcccatcgaatccgttcttcaag
aaatcggtcaagtga

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