KEGG   Rosa chinensis (China rose): 112179374
Entry
112179374         CDS       T06020                                 
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn04136  Autophagy - other
rcn04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    112179374
   04136 Autophagy - other
    112179374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112179374
   03029 Mitochondrial biogenesis [BR:rcn03029]
    112179374
Membrane trafficking [BR:rcn04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    112179374
Mitochondrial biogenesis [BR:rcn03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    112179374
SSDB
Motif
Pfam: ATG5_UblA ATG5_HBR ATG5_UblB
Other DBs
NCBI-GeneID: 112179374
NCBI-ProteinID: XP_024173540
LinkDB
Position
7:39812697..39817677
AA seq 362 aa
MDMEAQRFLWEGAIPLQIHLHESEVTTLPSPPPALILAPRLGYLPLLASHLKPYFSTALP
PGVDTIWFDYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILIPCEGEDSIK
WNFINSLKEAAYIINGNCKNVMNMSQPDQVELWRSVLNGNLDSYRRVSSKLKLEAVGEMN
SSSPRSRLSMGEVDVSGQVKPGRVPVRLYVWNVSEDFDDLEDAPPVDSWDKVSYINRPVE
IQEGRCFTLHDAVKSLLPDYFVVKSLGTAESLTVVGDDEQRVSSEDASDDKKAEEEVETS
SDDHVKASYEHEEPEIKLVRIQGIEPKLEIPFSWVANNLMHPEHFLHISVYLKVRQVNNT
MS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggacatggaagcacagaggtttttatgggaaggagcaattcctttgcagattcatctc
cacgaatccgaagtcacgactcttccttctcccccgcccgccctgatcttagctcctcgg
ctagggtacctaccattgttggcctcgcatctaaagccttacttcagcaccgcacttcct
cctggtgttgacactatttggttcgactacaaaggcttgcccttgaaatggtatatacca
acaggagttctttttgatcttctttgtgcagaaccagagagaccctggaatttaacggtt
cattttagaggatatccaggaaacatattgatcccgtgtgaaggtgaagatagcataaag
tggaactttattaactcattgaaagaggcagcatatataatcaatggaaactgcaagaat
gtgatgaacatgtctcaacctgatcaggtggagctctggcgctctgtcttaaatggtaat
ttggactcctaccgacgggtatcttctaaacttaagcttgaagccgttggggaaatgaac
tcgagctcgccaagatcccgattgagtatgggtgaagttgatgtttctgggcaggtgaag
ccaggccgagttccagttcggttatatgtttggaatgtcagtgaggactttgatgactta
gaagatgcaccaccagttgatagttgggataaagtttcttacataaaccggcctgtcgag
atacaagaaggtagatgcttcactttacatgacgcagtgaagagccttctgccagactat
tttgtggtcaaatccttgggcactgctgagtcactgacagtagttggtgatgacgagcaa
agagtttcatccgaagatgcaagcgatgataaaaaagctgaagaggaagtagaaacttca
tctgatgaccatgtaaaggctagttacgaacatgaagagcctgaaatcaagctggttcgt
atacaaggtattgaaccaaaactggagataccattttcttgggttgcaaacaacttaatg
caccctgagcacttccttcatatctctgtatatttgaaagtacgacaagtcaataatacc
atgtcatag

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