KEGG   Rosa chinensis (China rose): 112179740
Entry
112179740         CDS       T06020                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112179740
Spliceosome [BR:rcn03041]
 Complex B
  Other components
   Complex B specific factors
    112179740
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd LisH_TPL Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Mala_s_1-like Beta-prop_VPS8 VPS8_N Beta-prop_Vps41 DUF7165 PD40 zf_topless Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 112179740
NCBI-ProteinID: XP_024173984
LinkDB
Position
7:54324252..54335226
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFVADINSGRWDAV
LPQVAQLKLSRNKLEDLYEQIVLEMIELREVETARSILRNTQVMGVMKQEQPERYLRLEH
LHARTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLQHTIKFGTKSHAECARFSPDGQFLVSTSFDGFIEV
WDYISGKLKKDLQYQADEAFMLHDDPVLCADFSRDSEMLASGDQCGKIKVWRIRTGQCLR
RLEHAHSKGVTSVTFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNNAIFTSD
GARVITASSDCTVKVWDSKTADCLQTFKPPPPLRGGDASVNSVHLFPKSNDHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFMAACVSPKGEWIYCVGEDRNLYCFSYQSGKLEHLM
KIHEKDVIGLAHHPHRNLLATFGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctaccttggaaatcgaagctcgagatgtcatcaagattgtgcttcaattttgcaaa
gagaattctctgcaccaaacgtttcagacattacagagcgagtgccaggtttcgctgaac
actgttgatagtgtggagacgtttgtagctgatataaatagtggaaggtgggatgcagtt
ttgccccaagtggctcagcttaagctgtctaggaataaattggaggatttgtatgagcag
attgtactggaaatgattgaacttcgagaagtagagactgctcgttctattttaagaaac
actcaggtaatgggtgtaatgaagcaagaacaacctgaaagatacttgcgactggagcat
ctccatgccagaacttatttcgatccaaatgaggcttatcaagattcgacaaaagagaaa
cggcgtgcacaaattgctcaagcacttgctgctgaagttactgtggtgccaccttcaaga
ttaatggctctaattggtcaggctctaaagtggcagcagcaccaaggattacttcctcca
ggaacacagtttgacttatttaggggaacggcagccatgaaacaggatgtggatgacttg
tatccaacaactcttcaacacacaattaagtttgggaccaaaagtcatgcagaatgtgct
cggttctcaccagatggccagtttcttgtctctacatcttttgatggatttatcgaggta
tgggattacataagtgggaaactcaagaaggatcttcaataccaggctgatgaagctttc
atgctccatgacgatccagtcctgtgtgctgattttagcagagattcagagatgcttgca
tctggggatcaatgtggcaagatcaaagtttggcgtattaggactggtcagtgcttgcgg
cgtcttgaacatgcacattcgaagggtgtcaccagtgttaccttctctcgagatggaagc
caaatacttagtacatcatttgacagcactgcaaggatccatggcttaaaatcggggaag
ctgttgaaagaatttcgcggtcattcatcttatgttaataatgcaatctttacaagtgat
ggtgcccgcgtaattaccgcatctagtgattgcacagtcaaggtctgggattcgaagact
gccgactgtctacagacatttaaaccacctcctcctttaaggggaggtgatgcttcggtg
aattctgttcatcttttcccaaaaagcaatgatcacatcgttgtatgcaataagacttca
tcgatatatatcatgacacttcaaggacaggttgtgaagagcttttcatctggtaaaaga
gaaggtggagattttatggctgcatgtgtgtcaccaaaaggggaatggatttactgtgtt
ggtgaagacaggaatctgtattgtttcagttaccaatctggaaagttagagcatttaatg
aagatccatgaaaaggatgttataggtctcgctcatcatcctcacaggaatcttcttgcc
acatttggtgaagactgcacaatgaagttatggaagccttga

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