Entry |
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Name |
(RefSeq) probable pectate lyase 4
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KO |
|
Organism |
rcn Rosa chinensis (China rose)
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Pathway |
rcn00040 | Pentose and glucuronate interconversions |
|
Brite |
KEGG Orthology (KO) [BR:rcn00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112180109
Enzymes [BR:rcn01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112180109
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
7:complement(36043980..36045825)
|
AA seq |
382 aa
MASQYCFVLVNVIILLCSLGPNLSLAKETKVHGLKMNAIDGCWRWNPNWRSNRQQLAMCS
VGFAGKMSNNIGKDVINYEVTDPSDNALNPQPGTLRYGATMIKGKKWITFQRDMKIKLEK
PLLVSSFTAIDGRGANVHIQGNACLRVFKATNVIIHGLRIHHCKSQPPTTVMGPNGIVSL
GAVDGDAIRLVTASKVWIDHNTLYECEDGLLDVTRGSTDVTVSNNWFRNQDKVMLLGHDD
GFLRDKNMKVTVVYNHFGPLCNQRMPRIRHGYAHVVNNLYREWTQYAIGGSMNPSVKSEA
NLFIAPKQNKEITWRQDSVNNSWKFYSKGDIFENGASFIQTGQGGAQPHYNMEQNFRVAD
AKSVRSLTRSSGALTCTKQSRC |
NT seq |
1149 nt +upstreamnt +downstreamnt
atggcttctcaatactgctttgttttggttaatgtcatcattctcctctgcagcttgggt
ccgaacctgagtttggcaaaggaaacaaaagtccatggcttgaaaatgaacgcaattgat
ggttgctggagatggaatccaaattggagaagcaaccgccagcaactcgcaatgtgttcg
gtaggatttgccggaaaaatgagcaacaacataggaaaagatgtcataaactatgaagta
acagatcccagtgacaatgcattaaatccccaaccaggcactttgagatatggagctact
atgatcaagggcaaaaaatggatcacattccagagggacatgaaaattaaactcgagaaa
ccattgctcgttagtagcttcactgcaattgatggaagaggtgctaatgtccacatacaa
ggtaacgcgtgcttgagagtgttcaaagcaaccaatgttatcatacatggccttcgaatc
caccactgcaaatcgcagccaccgaccacggttatgggtccgaacggaatagtttcacta
ggagcggttgatggagacgcaataaggttggttactgcatcaaaggtttggatagaccac
aatacactatacgagtgtgaggatggtcttctcgacgtcactcgtggatcaaccgatgtc
accgtctccaacaactggttcagaaaccaggacaaggtaatgcttctcggccatgatgat
ggcttccttcgggacaagaacatgaaggtgactgtagtgtacaatcattttggaccactc
tgcaatcagagaatgccaaggattcgccatggatatgcacatgtcgtaaacaacttgtac
agggaatggacacagtatgcaattgggggaagcatgaaccctagtgttaaaagcgaagcc
aacctcttcattgcaccaaaacaaaacaaagagatcacttggaggcaggacagtgttaac
aactcctggaaattttactctaaaggcgatatttttgaaaatggggcttccttcatccaa
acaggtcaaggtggagcccagccacactataacatggaacaaaatttccgagttgccgac
gccaaatctgtccggtcattgacaaggtcatcaggtgctctaacatgcaccaaacaatct
agatgctaa |