Rosa chinensis (China rose): 112180109
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Entry
112180109 CDS
T06020
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112180109
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112180109
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112180109
NCBI-ProteinID:
XP_024174385
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Position
7:complement(36043980..36045825)
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AA seq
382 aa
AA seq
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MASQYCFVLVNVIILLCSLGPNLSLAKETKVHGLKMNAIDGCWRWNPNWRSNRQQLAMCS
VGFAGKMSNNIGKDVINYEVTDPSDNALNPQPGTLRYGATMIKGKKWITFQRDMKIKLEK
PLLVSSFTAIDGRGANVHIQGNACLRVFKATNVIIHGLRIHHCKSQPPTTVMGPNGIVSL
GAVDGDAIRLVTASKVWIDHNTLYECEDGLLDVTRGSTDVTVSNNWFRNQDKVMLLGHDD
GFLRDKNMKVTVVYNHFGPLCNQRMPRIRHGYAHVVNNLYREWTQYAIGGSMNPSVKSEA
NLFIAPKQNKEITWRQDSVNNSWKFYSKGDIFENGASFIQTGQGGAQPHYNMEQNFRVAD
AKSVRSLTRSSGALTCTKQSRC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaatactgctttgttttggttaatgtcatcattctcctctgcagcttgggt
ccgaacctgagtttggcaaaggaaacaaaagtccatggcttgaaaatgaacgcaattgat
ggttgctggagatggaatccaaattggagaagcaaccgccagcaactcgcaatgtgttcg
gtaggatttgccggaaaaatgagcaacaacataggaaaagatgtcataaactatgaagta
acagatcccagtgacaatgcattaaatccccaaccaggcactttgagatatggagctact
atgatcaagggcaaaaaatggatcacattccagagggacatgaaaattaaactcgagaaa
ccattgctcgttagtagcttcactgcaattgatggaagaggtgctaatgtccacatacaa
ggtaacgcgtgcttgagagtgttcaaagcaaccaatgttatcatacatggccttcgaatc
caccactgcaaatcgcagccaccgaccacggttatgggtccgaacggaatagtttcacta
ggagcggttgatggagacgcaataaggttggttactgcatcaaaggtttggatagaccac
aatacactatacgagtgtgaggatggtcttctcgacgtcactcgtggatcaaccgatgtc
accgtctccaacaactggttcagaaaccaggacaaggtaatgcttctcggccatgatgat
ggcttccttcgggacaagaacatgaaggtgactgtagtgtacaatcattttggaccactc
tgcaatcagagaatgccaaggattcgccatggatatgcacatgtcgtaaacaacttgtac
agggaatggacacagtatgcaattgggggaagcatgaaccctagtgttaaaagcgaagcc
aacctcttcattgcaccaaaacaaaacaaagagatcacttggaggcaggacagtgttaac
aactcctggaaattttactctaaaggcgatatttttgaaaatggggcttccttcatccaa
acaggtcaaggtggagcccagccacactataacatggaacaaaatttccgagttgccgac
gccaaatctgtccggtcattgacaaggtcatcaggtgctctaacatgcaccaaacaatct
agatgctaa
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