KEGG   Rosa chinensis (China rose): 112180126
Entry
112180126         CDS       T06020                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03083  Polycomb repressive complex
rcn04120  Ubiquitin mediated proteolysis
rcn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112180126
   04120 Ubiquitin mediated proteolysis
    112180126
  09126 Chromosome
   03083 Polycomb repressive complex
    112180126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112180126
   04121 Ubiquitin system [BR:rcn04121]
    112180126
   03036 Chromosome and associated proteins [BR:rcn03036]
    112180126
Membrane trafficking [BR:rcn04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    112180126
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     112180126
   Cul7 complex
     112180126
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     112180126
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     112180126
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 112180126
NCBI-ProteinID: XP_024174399
LinkDB
Position
7:complement(46979594..46981145)
AA seq 159 aa
MSSEKKIITLKSSDNETFEVDEAVALESQTIKHMVEDGCADNAIPLPNVTGAILAKVIEY
CKKHVEEGGKDAEKDKAGDSPLKEFDSDFIKVDQNVLFDLILAANYLNIKGLLDLTCQTV
ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcgtccgagaagaagatcataaccctaaagagctccgacaacgagaccttcgaggtc
gacgaggcggtggccctggaatcgcagaccatcaagcacatggtggaggacggctgcgcc
gacaatgcgatccccttgcccaacgtcaccggcgccatcctagccaaggtgatcgagtac
tgcaagaagcacgttgaggagggcggcaaagatgccgagaaggacaaggccggcgactcg
ccgttgaaggagtttgactccgatttcatcaaggtcgaccagaacgtcctgttcgacctc
atcttggctgccaactatctgaacatcaagggacttctggatctgacttgccagactgtg
gcagacatgattaaggggaagactcctgaagagatccgcaagactttcaacattaagaat
gacttcactccggaagaagaggaggaggttcggagggagaaccagtgggcatttgagtga

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