Rosa chinensis (China rose): 112180139
Help
Entry
112180139 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1 isoform X1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112180139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
AAA_16
LRR_4
AAA_22
LRR_R13L1-DRL21
LRR_8
AAA_14
NACHT
NPHP3_N
ATPase_2
P23-45_portal_barrel
LRR_At5g56370
APAF-1-like_WHD
ATPase
DUF5595
Motif
Other DBs
NCBI-GeneID:
112180139
NCBI-ProteinID:
XP_024174408
LinkDB
All DBs
Position
7:28491605..28495346
Genome browser
AA seq
947 aa
AA seq
DB search
MAESAVKFLLDKLAPLFENELQLLRGVREEILYLRGELERMTAFLRVADAYEESDAELKV
WVKQLRDIAHESEDVLDEFTLLQAHDHGEGLYGSIHKLSCCIKNTKARYRIASELRAINS
RIKKISEVHKRLHHKFNMAEQGSSSKSAGYLLEDHRGDALLLEKTDIVGIDEPIKQMVGR
LVNGGCGREVVSVAGMGGMGKTTLAKQVYDAAEVKKHFKLCAWITFTQSFKLAELLKDIV
QQLHQAIRSPVPQEINSMNTNQLKTIIKDFLQKRRYLIVLDDVWHLYGWDALKYALPNNI
YGSRVILTTRNADIASTTSTESGGEVYTLEPLPPVESWELLCKKTFQGNSCPPHLEKICN
YVLRKCEGLPLAIVAISGVLAAKDKRRIDEWEMVGHSLGAEIEGNDKLQDLKKVLSLSFN
DLPYYLKSCFLYLSIFPEDHLIKHMRLIRLWMAEGFIEEKQGKTLEEVAEDYLNELLNRS
MIQAAETTADGRVTKFRIHDLFREIITSKTRSQNFATIAKEQNVTLPAKIRRLSIHNTLQ
YVQTNRCASQLRSLFMFTVAEKPSLQRLFPAGFALLNVLDLQSTPLNVFPVEVVNLYFLK
YLSLRDTRVKTIPRFIGKLQNLETLDLKHSRVTELPVEILKLQHLRYLLVYRYEFVPYED
FHSTYGFKVLAKIGALKSLQKLCFIEVNQGGSALLRELGKLVQLRRLGIVKMRKKDGKAL
SSSIEKLSKLYALSITSVEEDEIIDLQHLCSPPLLLQHLYLRGRLEALPHWIPSLHSLVK
LYLKWSRLRDDPLAFLQYLPNLVHLELCQVFEGDTLCFGAGGFKKLKHLCLDKSDELRCI
EMEVGTMPCIENLIIRRCKSLEKVPSGIEHLIKLKLLKFFDMPEKLIKTLLPHQHGNDYW
KVAHVPEVYVTYLREFGWEVFSLEGLSETQISSQPSSVMKSIGTGWK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtgcagtaaagtttctacttgacaagcttgcacctcttttcgaaaatgag
ttgcaacttttgagaggggttagggaagaaattttgtatctaagaggagaactggagcgc
atgacggctttcctgagggttgctgatgcatatgaagagagtgatgcggaactcaaagta
tgggttaaacaactaagagacattgctcacgaaagtgaagatgttcttgatgaatttacc
cttctgcaagcacatgatcatggggagggattatatggttcaatccataagctttcttgc
tgcatcaagaatacaaaagctcgatatcgaattgcttcggagttacgagccataaactcc
aggatcaaaaaaatctctgaggttcataagcgactccaccacaaattcaatatggctgaa
caaggctcaagctccaaaagtgcaggttacctgttggaggaccatcgaggtgatgcttta
cttctagagaaaactgatatagtgggcatagacgagcctattaagcagatggttgggagg
ctggtcaatggtggttgtggacgtgaggtagtttctgtggcaggaatgggaggaatgggg
aaaactaccctggcgaagcaagtctacgatgcagcagaagtgaagaaacatttcaaatta
tgtgcttggatcacttttactcagtctttcaagctagcggaacttctcaaagacatcgtt
caacagctccaccaagcaatccgaagtccagttccacaagaaatcaatagcatgaatacc
aaccagctgaaaacaataattaaagacttcctacagaagaggaggtatctcattgtcttg
gatgatgtgtggcacttatatggatgggatgccttgaagtatgcactgcctaataatatt
tacggcagcagagtgatactaactactcgaaatgcagatatagcctccacaacaagcaca
gaatctggaggtgaagtctatactttggagcccttgcccccagtggagtcatgggagctc
ctgtgcaagaagacattccaagggaattcctgccctccacatttagagaaaatctgtaac
tatgttctgagaaagtgtgaggggctaccccttgctattgtggcaattagtggagttctg
gctgctaaagataagcgcagaattgatgagtgggaaatggttggccacagtctcggggct
gaaattgagggcaatgacaaactgcaggacttgaagaaagtactttcactcagtttcaat
gatttaccatactatctaaaatcgtgcttcttgtacctgagcatctttccagaggaccat
ctaattaagcatatgaggcttattcgattatggatggcagagggcttcattgaagaaaaa
caaggaaagacattggaagaggttgcagaggattacctcaatgaactattgaataggagc
atgattcaagcagcagagacaacagctgatggaagggtcacaaaatttcgtatccatgat
ctcttccgcgaaattatcacctccaagacaagaagtcagaactttgccacaatagccaaa
gagcagaatgtaacattgccagcaaaaatccgtcgcctgtcaatacataacacactgcaa
tatgttcagacaaacaggtgtgcttctcaactacgttctctttttatgttcacagttgct
gagaagccatcactacaaagactattcccagccggctttgcgctgcttaatgtgttagat
ttgcaaagtacacctttaaatgttttcccagttgaagttgtgaatctttactttttaaag
tatctgagcttgagagataccagggtaaaaaccattccaagatttatagggaagcttcag
aacctggaaactttggatcttaagcattctcgagttactgaactcccagttgaaattctg
aaactccaacatctgcgctatctcttggtatatcgttatgagtttgttccttacgaagat
tttcactcaacatatggttttaaggtccttgcaaaaataggagctttgaaatcccttcaa
aagctatgttttattgaggtgaaccaaggtggcagcgcattattgagagagctggggaaa
ctagttcagttgagaaggttaggcattgttaagatgaggaaaaaagatggcaaggctctt
tcttcatccattgaaaagttgtccaaactttatgcattgtccataacttcagtggaagaa
gacgagatcattgatttgcagcacctgtgttctcctcctctattgcttcagcatttgtac
ttgcgaggcagactggaagcattacctcactggataccttctctccatagcctcgtcaag
ttgtatttgaaatggagcaggttaagggatgatccacttgcattccttcagtatttgccc
aatctagtacatcttgagttgtgtcaggtttttgaaggagacacactatgttttggagcc
ggcggatttaagaagctcaagcatttatgcctcgataaatctgatgaacttcgatgcata
gagatggaggtgggaacaatgccttgtattgaaaatctaatcatccggcgctgtaaatca
ctggagaaagtcccatcaggcattgaacatctcatcaaactaaagttgcttaagtttttt
gatatgccagaaaaactaatcaagactctacttccacatcagcatggcaatgattattgg
aaagttgcgcatgtcccagaagtttatgtcacctacttgagagagtttgggtgggaagta
ttctcattagagggcttgagtgagacacaaatctcttctcaacccagttctgtcatgaag
agcattggaactggttggaagtaa
DBGET
integrated database retrieval system
