Rosa chinensis (China rose): 112180170
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Entry
112180170 CDS
T06020
Name
(RefSeq) (-)-germacrene D synthase
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112180170
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112180170
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
DUF3491
Motif
Other DBs
NCBI-GeneID:
112180170
NCBI-ProteinID:
XP_024174442
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All DBs
Position
7:complement(29705884..29710617)
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AA seq
558 aa
AA seq
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MSFQVLASQAQARDTVADVKRHSANNYTPNIWGDHFLHYATTEVDIKLEQHVRELKDQVK
RMLMDPVKKPSQQLDLVDNIQRLGVSYHFENEIDGILKQIHHNYSNGSDDDLYTTALIFR
LLRQQGYSVSCDMFNKFREGNDQKFKASLLSDVSGLLSLYEATHLRIRGEDLLEEALDFT
TTHLESIKHSLSPSLSKQVVHSLNQALRRGIPRVEARYYLSIYAEHDSHNETLLTFAKLD
FNLLQQVHQKELCEITRWWKDLDVTNKLPFTRDRITEIYFIWALSVYFEPQYSFARRTTC
KVTAMMAILDDIYDTRGTLEELELFTEVIHRWDICAIDPLPDYMKVCYKALLEVYTEIEE
ELAKEGKLYRIHYAREAMKKQAEVYFLEAKWLHHQYIPTMDEYMALSLLTSGYPQLITTS
FVAMGDVATQDSFDWLDTYPRAVKGAAVVARLMDDIADHKFEEKRGHVISAVQCYMNECG
VTEEEAITVLRRQVSDAWKDINESFLLPNAVPRPLLTRILNFACAMDVSYKYEDGFSTHH
ETVLKDFIISTLVQPLPV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccaagttttagcttctcaagctcaagcacgagataccgttgctgatgttaag
cgacattcagctaataattataccccaaacatttggggtgatcattttctccattatgct
accacggaagttgacattaaacttgagcaacacgtccgagaactaaaagatcaggtgaag
aggatgctaatggatcccgttaaaaaaccttcacaacaattggacttggttgataacatt
caacgcctaggtgtgtcctatcattttgaaaatgagattgatggaattttgaaacaaatt
caccacaactactcaaatggtagtgatgatgacctttacactactgctctcatttttcgg
ctacttagacaacaaggttatagcgtttcatgcgatatgttcaacaaattcagggaagga
aatgatcagaaattcaaggcatctcttctgagtgatgtatcaggactattaagcttgtac
gaagccacccatcttaggatacgtggagaagacctacttgaagaggcactagacttcacc
accactcatcttgagtcgatcaaacacagtttaagcccttcactttcaaaacaagtagtc
cattccttaaatcaggcacttcggaggggcatcccgagggtggaagcaagatattacttg
tcaatctacgcagaacacgattcacataatgaaactctcctgacttttgcaaagttagat
ttcaacctactgcaacaagtccatcaaaaggaactatgtgaaattacaaggtggtggaag
gacttggatgtcacaaacaagctgccgttcaccagagacagaattaccgaaatttacttc
atttgggctttgtcagtgtacttcgaacctcaatattcctttgctaggaggacaacatgc
aaagtcactgccatgatggctatcctcgatgacatttatgatacacgtggcacactcgaa
gaactagagctttttactgaagttattcacaggtgggatatctgtgccatagatccattg
ccagattatatgaaagtctgttataaggcattgttagaagtttatactgaaattgaagaa
gagcttgcaaaggagggaaagttgtatcgaatccattatgccagagaagctatgaaaaaa
caagctgaagtttacttccttgaagctaaatggctgcaccaccaatacataccaacgatg
gatgaatatatggccctatcattattgacctcaggctaccctcaactaataacaacatct
tttgttgcaatgggagatgttgctacacaagactccttcgattggttggacacttatccc
agggctgtaaaaggggctgcagtagttgctcgactcatggatgatatagcggaccacaag
tttgaggaaaagagaggacatgttatctcagctgtgcagtgctacatgaatgaatgtggt
gtcacagaagaagaagcaataactgtattgcgtagacaagtgagtgacgcatggaaggac
atcaacgaatcattcctccttcctaatgctgtcccgaggccactactaacccgaattctt
aattttgcatgtgccatggatgtttcatacaagtatgaagatggtttctctactcatcat
gagactgtgctcaaggattttataatttctacgcttgtccaacccctgcctgtataa
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