Rosa chinensis (China rose): 112181433
Help
Entry
112181433 CDS
T06020
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112181433
09122 Translation
03013 Nucleocytoplasmic transport
112181433
03015 mRNA surveillance pathway
112181433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112181433
03041 Spliceosome [BR:
rcn03041
]
112181433
03009 Ribosome biogenesis [BR:
rcn03009
]
112181433
03012 Translation factors [BR:
rcn03012
]
112181433
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112181433
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112181433
mRNA cycle factors
Stress granule specific factors
112181433
Spliceosome [BR:
rcn03041
]
Complex C
Other components
EJC/TREX
112181433
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
Helicases
112181433
Translation factors [BR:
rcn03012
]
Eukaryotic type
Initiation factors
eIF-4
112181433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
TniB
DUF1198
Motif
Other DBs
NCBI-GeneID:
112181433
NCBI-ProteinID:
XP_040368278
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MALRSPQLSSNGPSDPLLSAGMLSPRRSPGSGIDTFSNEGIGGPDRESDIGNWKLPKYSC
IGGKSLGEDIRRLENGVHVVSGTPGRVYDMLDRKTLHPRQIKLLILDESDEMLSRGFKDQ
IYNVYRYLSHEVQVCLISATLPNEILEMTKLFMTDPVRILVKRDELTLQGIKQFFVSVER
EDWKFDTLCDLYDTLTITQAVVFCNTKRKVDWLSEKLRSNNFTVSSMHGDMPQKERDAIM
KDFKNSESQILITTDVWARGIDVQHVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF
VKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagaagccctcagctatccagcaacgggccatcagacccattattgagcgca
gggatgttatcgcccaggcgcagtccgggttcaggcattgatactttctccaacgaggga
attggcggcccagacagagaaagtgatattggcaattggaaattacctaaatattcatgc
ataggaggcaaaagcttgggtgaagatatcagaaggctagagaacggagttcatgtggtg
tctggaactcccggtagagtctatgacatgctcgacaggaaaactctacatcctcgacaa
attaaattattaattctcgatgaatctgatgaaatgttgagcagaggcttcaaggatcag
atttacaacgtctaccgctatctttcgcatgaagtccaagtatgcttgatttctgccaca
cttccaaatgaaattctcgagatgactaaactattcatgactgatcccgtaaggatcttg
gtcaagcgtgatgagctgactttacagggaatcaagcaattttttgtttcagttgaaaga
gaagattggaagtttgatactctctgtgatctctatgatacccttacgattacacaagct
gttgttttctgcaacacaaagcgaaaggtcgattggctcagcgaaaagttgcggagcaat
aacttcactgtgtcttcaatgcatggagacatgcctcagaaagagagagatgctataatg
aaagactttaagaacagtgaatcacaaatcctcatcacaacagatgtttgggctcgaggc
atcgatgttcaacacgtttcgttggttatcaactatgatcttccaaacaatcgagagctg
tacattcatagaattggtcgttcgggtcgttttggacgcaaaggtgtggcaatcaacttt
gtcaagaacgatgatatcaggattttaagagacattgaacagtactacagtacccagatt
gatgagatgcccatgaatgtggctgatttaatatga
DBGET
integrated database retrieval system
