Rosa chinensis (China rose): 112181454
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Entry
112181454 CDS
T06020
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112181454
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rcn04812
]
112181454
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
112181454
Membrane trafficking [BR:
rcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112181454
Cytoskeleton proteins [BR:
rcn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112181454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_5
NPHP3_N
AAA_16
AAA_22
AAA_14
TIP49
Mg_chelatase
AAA_2
DUF815
RNA_helicase
nSTAND3
MIT
AAA_25
IstB_IS21
MCM
Guanylate_kin
AAA_24
NACHT
Motif
Other DBs
NCBI-GeneID:
112181454
NCBI-ProteinID:
XP_024175563
LinkDB
All DBs
Position
1:complement(44073864..44079644)
Genome browser
AA seq
492 aa
AA seq
DB search
MSFLKGLIDSLGSVFSESSSSSSYPNPTASNSPAMDGVAGPGAASVTNERVAYKLKGYFD
LAKEEIAKAVRAEEWGLVEDAVAHYNSAQRILAEASSTPVPSFISASEREKVKSYRQKIS
KWQGQVSDRLQVLSRRPGGTSISKTVAPARTTAATSTTLNSRNHVIPKTLHPSTSMPATR
SQTNNIVRSKPVQDSGAGYDEKLVEMINSAIVDRSPSVKWEDVAGLEKVKKTLMEMVILP
TKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEK
LVRTLFMVAISRQPSVIFMDEIDSIMSTRQANENDASRRLKSEFLIQFDGVTSNPNDLVI
VIGATNKPQELDDAVLRRLVKRVYIPLPDLPARRLLLSHKLKGQAFSLPSGDLERLARDT
EGYSGSDLQALCEEAAMMPIRELGENILTIKANQVRPLRIEDFQKAMTVIRPSLSKSKWE
EVEQWNEEFGSN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctcaaaggcctcatcgactctttaggctccgtcttctccgaatcctcctcc
tcttcttcatacccaaaccctaccgcttccaattcccccgccatggacggcgtagctggg
cccggagctgcttcggtcacgaacgagcgcgtggcgtacaagctcaaggggtactttgat
ttggccaaggaagagatcgccaaggctgttagggctgaagaatggggcttggttgaagac
gccgttgcacactataatagcgcccagagaattctagccgaagctagctccactccagtg
ccttcctttatcagcgccagtgagcgggagaaggttaaatcgtatcgtcaaaagatatca
aaatggcagggtcaagtttctgataggttacaagtcttaagtagacgtccaggtggtacg
tccataagcaagaccgtagctcctgcacgaactactgcagctacatcaacaacgttgaat
tcacgaaatcatgtgatacccaagactctgcatcccagtacaagcatgccagcaacgagg
agtcagaccaataatattgtaagatcaaaacctgtgcaagattctggtgcaggttatgat
gaaaagttggttgaaatgataaatagtgccatagtggatagaagtccttctgttaaatgg
gaagatgttgctggtcttgagaaggtgaagaaaactttgatggagatggttattttaccg
actaagagaagagatttgttcactggccttcgaaggccagctcgaggtctgcttctgttt
ggtccacctggtaatgggaaaaccatgcttgctaaggcagttgcttcagaatcagaggca
accttttttaatgtatctgcatcttcactgacatcaaaatgggtgggagaggctgaaaag
ctcgtgcggacacttttcatggttgctatatccagacagccatctgtaattttcatggat
gagattgatagtatcatgtcaacaaggcaggcaaacgaaaatgatgcaagcagaaggttg
aagtcagagtttctaattcagtttgatggagtgacatctaatcctaatgatctagtaatt
gtgattggtgctactaataagcctcaagaactagatgacgcagttcttaggagattggtg
aagagagtatacatacctttaccagatctacctgctaggagacttctcctaagtcacaaa
ctcaaaggccaagcattttccttaccaagtggagatcttgaacgacttgcaagagacact
gaaggttactcaggaagtgatctacaagcattgtgtgaagaagcagcaatgatgccaatt
agggaacttggtgaaaacattctcaccatcaaggcaaatcaggtaagaccactaagaatt
gaagactttcagaaggcaatgactgtaatcaggccaagtttaagcaaaagcaagtgggaa
gaggttgaacaatggaacgaggaatttgggtctaactga
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