Rosa chinensis (China rose): 112181824
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Entry
112181824 CDS
T06020
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112181824
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112181824
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
PITH
Motif
Other DBs
NCBI-GeneID:
112181824
NCBI-ProteinID:
XP_024175989
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Position
1:complement(19464181..19466703)
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AA seq
476 aa
AA seq
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MEGRILATIFLFIIILVASPSPSSCARLNGFPTTYTLRDDGAIGYYGDQVAAATSNSFHD
KEYGDVFATPNTFKEYYRPLANRQTDDDLQAFPDAWRSLAKSEFNVMNYGAVGNGQVDDT
QAFLKAWGDVCGSTQGIPTLIIPKGNTFLLNSVEFKGPCRAASVNFQLSGNIVAPNNMNA
WKDKDQWVQFDDVQGLIINGGGQIDGQGQVWWKVCDTTNCQRPTALHISKCDGLRLSNIT
HINSARNHISISGCNGVQISDILIRAPDESPNTDGIDISASTNINIHNSFIGTGDDCIAI
ISGSSHINITNVMCGPGHGISVGSLGKQGSYSTVEDVQVRNCTFNGTQNGARIKTWQGGS
GYARNISFEDIIIQAAKNPIIIDQKYTDNLSTGTGTGTLLDQENAVQVSDVTFRNIRGSV
AGDTAVTLDCDDQIGCKNIVMDHIDLTSSVPGKKVSAHCKNVKGLSTLLSPSVSCL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgaatacttgctacgatctttttgttcataatcattctggttgcttcacct
tcaccaagttcatgtgccagacttaatggttttcccacaacatatactttaagagacgat
ggtgccattggttattatggtgatcaagttgctgctgcgacatcaaattcatttcatgat
aaggagtatggtgatgtttttgcaaccccaaatacattcaaagagtattatcgtcctctt
gcaaatcgccaaaccgatgatgatttacaagcattcccagatgcatggagatcacttgca
aaaagcgaattcaatgtgatgaattatggcgctgttgggaatggccaagttgatgataca
caagcctttctaaaagcatggggagatgtttgtggatccactcaaggcatccctacactt
attataccaaagggcaacactttcttgctcaattctgtggagtttaaagggccttgcagg
gctgcaagtgtaaatttccagctaagtgggaacattgttgcaccaaataatatgaatgct
tggaaagacaaggaccaatgggttcagtttgatgatgttcaaggtctgataatcaatgga
ggaggtcaaattgatggtcaaggtcaggtttggtggaaagtttgcgacactacaaattgc
caacgaccaactgctcttcatattagcaagtgtgatggtctccgcttgagtaatattaca
catattaatagtgcgagaaaccatataagcatcagcggctgcaatggcgttcaaatttct
gatatccttattagggctcctgatgaaagtccaaacactgatggaattgacatctctgca
tcaaccaatattaacattcacaattcttttataggcactggtgacgactgtattgcaatc
atttctggttcatctcatatcaacattactaatgttatgtgtggtccaggccatggtata
agtgttggaagtcttggtaagcaaggttcttatagcacagtggaagatgtgcaagtgaga
aactgcaccttcaacggaacacaaaatggagcaagaatcaagacatggcaaggcgggtca
gggtatgctaggaacatcagttttgaggatatcataattcaagctgccaagaaccctatc
attatagaccagaagtatactgataatctctctactggaactggaactggaaccctgctt
gaccaagaaaatgctgtacaagtgagcgatgtgacattccgtaacattcggggatctgtt
gctggggatacagccgttactttggattgtgacgatcaaattggttgcaaaaacattgta
atggatcacatagacttaacttcatctgttcctggcaagaaggtttctgcccactgcaag
aacgttaaaggattatctactttattatctcccagtgtgtcgtgtctttaa
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