| Entry |
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| Name |
(RefSeq) putative transcription elongation factor SPT5 homolog 1
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| KO |
| K15172 | transcription elongation factor SPT5 |
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| Organism |
rcn Rosa chinensis (China rose)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rcn00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112181892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rcn03021]
112181892
03019 Messenger RNA biogenesis [BR:rcn03019]
112181892
Transcription machinery [BR:rcn03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112181892
RNA polymerase I system
112181892
Messenger RNA biogenesis [BR:rcn03019]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
112181892
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(50798221..50800982)
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| AA seq |
702 aa
MPNRRDDYEEEEESEMREERRANSKRGRLNSDEIEIQKRRGRGSNSKKRKLKTVAEEEEE
EEGGGGRPFKSVFVDDEAIEDEDEEEEEDDDGELDGFIVNEPEFDNEPDEVEHDGGGGGR
MGFVLPEEEEEEDIDEFERRVQDRFRDVHVEEYEDDTEVGQQALIPGVKDPKLWLVKCAI
GKEREVAACLMQKCIDSPGELQIMSAIALDHLKSFIYVEAYKEAHVREACKGLRYVILQK
IMLVPIKEMIDVLSCESKSVVNDKWVRIKTGVYKGDLAKVVGHVPGRQQVRVKLIPRVDL
QALAKGAESSKKKESGARPDRVPALLRNMNLVRQLGVRVQSMRDPLARGYIEKIDGLSGM
IFKDGFHLKVVSDKSIKEAKPSLQELEEFQELDGDGDHTIPNRKKGESFMKGDAVIVTEG
DLRNLVGRVEKVELGTVHIKAEMDGLPETVAINQTALQKCFKEGQHVKVVSGSQQGATGM
VVKVDQQKQLITILSDATNEAICMFSDHAVESPEVNNGDTMGDSHCLRYHKIPSQSPRFS
GGARRHDGQDGFGKGSRVKFRLGPYKGCRGRVVEVKGSNVRVELESQMKTVVVDRLHCIS
ESGNVAAAVTTPYRSGCETPMPYMRTPMRDPGATSMPYMTTPMRDPGASPMRYMTTPYMM
TPRRDYPRATPIHGGMRTPSMTPMRDPRATPIHGGMRTPPIY |
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| NT seq |
2109 nt +upstreamnt +downstreamnt
atgccaaatcggagagacgattatgaagaagaagaggagagcgagatgcgggaggagcga
agggccaattcgaagcgggggagattgaattctgatgagattgagatccagaagcggaga
gggcgagggtcgaattcgaaaaagaggaaattgaaaacggttgcggaggaggaggaagaa
gaagaaggcggtggtggaaggccttttaagtcggtgtttgtggatgatgaggctatagag
gatgaagatgaggaggaggaggaagacgatgatggtgaattggatgggtttattgttaat
gaaccggagtttgataacgaacctgatgaagttgaacatgatggtggcggtgggggaagg
atggggtttgtcttgccggaggaagaagaggaggaagatattgatgagtttgaaagaagg
gttcaagacagatttagggatgttcatgtggaagaatatgaggatgatacggaggttgga
cagcaagctctcatacccggtgtgaaggacccgaaattgtggttggtgaagtgtgccatt
ggtaaagagagagaggtagcggcttgtctaatgcagaagtgtattgatagtcctggagaa
ttgcagatcatgtctgccattgctttggatcacttgaaaagcttcatatatgttgaagct
tacaaagaagcccatgtgagggaagcttgcaaaggtctgaggtatgtaattctgcagaaa
ataatgcttgttcctattaaagagatgattgatgtgctatcatgtgaaagcaagagcgtt
gtaaatgataaatgggttaggattaagacgggagtatataaaggggaccttgccaaggtt
gtggggcatgtcccggggagacagcaagttagagtaaagttaattccaagggttgattta
caagctcttgcaaaaggtgcagaatcatcgaagaagaaggaatctggtgcacgtcctgat
cgtgttcctgcacttcttaggaacatgaacctagttagacagctgggtgtacgagtacag
tccatgcgagatccattggcacgtggttatattgagaagattgatggcttatctgggatg
atctttaaagatggtttccatcttaaagttgtttctgataaaagtataaaagaggcaaaa
ccctccttgcaagaacttgaagaattccaggaacttgatggtgatggagatcatacaatt
ccaaatagaaagaaaggcgaaagctttatgaagggcgatgcagttattgttacggaggga
gatctgagaaacttggtgggacgggttgagaaagttgagttagggactgttcatatcaaa
gcggaaatggatggcctcccggaaaccgttgccatcaatcaaacagcacttcagaaatgc
tttaaagaagggcagcatgtgaaggttgttagcggtagtcaacaaggagcaactggcatg
gttgttaaggttgatcagcagaagcagttgatcaccattttatctgatgcaaccaatgaa
gctatctgcatgttctctgatcatgctgtggagagtcctgaagtgaataatggtgataca
atgggcgactcccactgcttaaggtatcacaaaatccctagtcaaagtccgaggttttct
ggaggtgcaagaaggcatgatgggcaggatggttttggtaaagggagccgagtaaagttc
cgtctaggtccctataaaggctgcagggggcgtgttgtggaggttaaaggatcaaatgta
agggttgaactagagtcccagatgaaaactgttgttgttgatcgtctacattgtatttca
gaatcaggtaatgttgctgctgcagttacaacaccatatcgctctggttgtgagacccca
atgccttacatgaggactcctatgagagatcctggagcaacgtcaatgccttacatgaca
actcccatgagagatcctggagcatccccaatgcgttatatgacgactccctacatgatg
actcccagaagagattacccccgagcaacaccaatacatggtggcatgagaactccatct
atgactcccatgagagatccccgagcaacaccgatacatggtggcatgaggacccctcct
atatattag |
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