Rosa chinensis (China rose): 112181900
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Entry
112181900 CDS
T06020
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112181900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112181900
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
112181900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Pkinase
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Mab-21
MPI_cupin_dom
Motif
Other DBs
NCBI-GeneID:
112181900
NCBI-ProteinID:
XP_024176072
LinkDB
All DBs
Position
1:complement(50848763..50854919)
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AA seq
986 aa
AA seq
DB search
MAANVVRIGELKQKDCDLKLEGKTLLGLPAMCTDNCSTNMEEKDLSKRVTSSSGYESLCR
SPRSITGIAPDAQELKLKYLRNPNSADYSQVRIGFRSKDSHGDSVSEDNDQMLLRVRREL
REIHSGIRSLKPSSSNSSEQDPDKMSAYVRARNSKIISSNMLSIAKNHLKIQSLVKETVK
GKGISEIPVMDQKVSCDTRMKSLNQNGQHSSFVLDRSGPESISTGICLREWLEPGRHKVD
IAERLLIFRQIVELVDCAHYQGVALQELRPSRFILLPSNVIKYTGASAIRQSDSIVNRDL
SKKRLLEQGACAGRNLGGKQRKMSEEMISVKYQPQYTSSCGSGTKVRNEKEFCIDPQDSG
YGELQFQNAVLLPKQQTISATIHLEETWYTSPEDLGEIGCTLSSNIYGLGILLFELLCCC
ESWKVHSAVMSDLHHRILPPNFLSRSPKEAGFCFWLLHPEPLSRPTTREILQSELIGGHK
EVYQCDDFSNFDDDLDAESELRSFLLSLKDRKHGRASKLIEDIRCLEEDISKFTTRHLSR
ESLDYFRAQNELSGEREQGFCLEEPVRSGVCSRLFSASDMDETQMMKSISQLDNAYFSAR
SQMLVMETASAAGSNKDMLNKLDSHVRNCTQDLSVNKKSGDPLGAFFDGLTKFACHKKFK
ECGTLRNADLLNSSSAICALSFDRDEDYIATAGVSKKIKIFDFGALVDNSLDIHYPSVEM
SNNSKLSSVCWNNYFKSYLASSDYDGVVQIWDANTGQRVCQHKEHERRAWSVDFSQADPT
KFASGSDDFSVRLWDVKEENSINTIWNPANVCYVQFSAYSSHLLILGCADYKIYGYDLRH
TRMPWCTLPGHEKAVSYVRFVDKETLVSASTDNTLKLWDLNKSSSTGLSSNACSLTFSGH
TNEKNFVGLSVFDGYIACGSETNEVYSYHRSLPIPITSHKFGPIDPVPRSEIGDSGPYVS
SVCWQRKSNTLVAANSSGTMKLLQIA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaatgtggtaaggattggagaacttaagcaaaaggattgtgatctcaaacta
gagggtaaaacattgttggggttaccagcgatgtgcacagataattgtagtactaatatg
gaggagaaggatttgagtaaacgtgtaacctcctcatctggatacgagtcactctgcaga
agtcctcgttccataactggcattgcccctgatgctcaagagttaaaattgaaatatcta
aggaatccaaactcagctgattatagtcaggtaagaattgggtttagaagtaaggattca
catggtgattctgtgtcagaagataatgatcagatgttgttgagagttagacgcgagctt
agagaaatccattctggcatcaggagtctgaagccttcttcaagcaattcctctgagcaa
gaccctgataaaatgtcagcatatgtaagggctaggaacagcaagatcatctcaagcaat
atgttaagtattgccaaaaaccatctgaagatccaatctcttgtgaaggaaacagttaag
ggtaagggtatcagtgaaatcccagttatggaccagaaggtatcttgcgatacaaggatg
aaatcacttaaccaaaatggtcagcattcttcatttgtccttgataggtctggtcctgaa
tctatcagtactgggatctgcttgagggagtggcttgaacccgggcgtcacaaagtagat
atagctgaaagactgctcatatttaggcagattgtggagttggtggattgtgcacactat
caaggtgtcgccttgcaagagttgcgaccatcacgcttcattttattgccatcaaatgtt
attaaatatacaggtgcatcagccattagacaatcagacagtattgtgaaccgagatttg
agtaagaagaggctgttagagcaaggggcctgtgctggacgtaatttaggtggaaaacag
cgaaaaatgagtgaggagatgatatctgttaaataccagcctcagtacacctctagttgt
ggctctgggactaaagtacgtaatgagaaggaattctgcatagatccacaagattctggg
tatggtgaactccagttccaaaatgcagtactattacccaaacaacaaaccatttctgca
actattcatttggaagagacgtggtatacgagcccagaggatcttggtgagataggttgc
acactgtcatcaaatatctatggccttggcattcttctttttgagttgttgtgctgctgt
gaatcatggaaggtgcattctgcagtgatgtcagatttgcaccatcgaatcctaccacca
aattttctttcacgaagtccaaaggaagctggcttttgcttttggcttctccatcctgaa
cctttgtctcgtccaacaactagagaaatcttgcagtctgaactcataggtggacacaaa
gaagtgtatcagtgtgatgatttctcaaattttgatgatgatcttgatgcagaatcagag
ttacgtagttttctcctctcattaaaagacaggaagcatgggcgtgcctctaagttaatc
gaagatataagatgcttagaagaagatataagcaagtttacgacaaggcacttatctagg
gaatccttagattatttcagggcacagaatgagctttccggtgaaagagaacagggattc
tgtctggaagagcctgtacgctcaggtgtttgttctagattattctcagcatctgacatg
gatgagacacaaatgatgaaaagcatcagtcagctagacaatgcctacttctccgcaaga
tcccaaatgctggttatggaaacggcttctgcagcaggttctaataaggatatgttaaac
aagctagatagtcatgtgcgaaattgtactcaagatttaagcgtcaataagaaatcaggt
gatccccttggggccttttttgatggtctgaccaagtttgcttgccacaaaaagtttaaa
gaatgtgggacactaaggaatgcagatcttctcaactcttccagtgcaatctgcgcttta
agttttgaccgtgatgaggactatattgctacagccggagtatcaaagaaaatcaaaatc
tttgattttggtgcccttgtagacaactctttagatatccattatccttcagttgagatg
tcaaacaattctaagctgagctctgtttgctggaacaactactttaagagctatctggca
tcatcagattatgatggagtggtacagatatgggatgcaaacacgggtcaaagagtttgt
caacataaagagcatgaaaggagggcttggtctgtcgacttttctcaagctgacccaaca
aagtttgctagtggaagtgatgacttttctgtgagactgtgggatgttaaagaggaaaat
tcaataaacacgatctggaaccctgctaatgtctgttatgttcagttctctgcgtactct
tctcatctcttgattcttggatgtgctgattacaagatctacggctatgatcttcggcat
actagaatgccttggtgcactttacctggtcatgaaaaagctgttagctatgtcagattt
gtagataaagaaactcttgtttccgcttccacggacaacactctgaagctttgggatctt
aacaaatctagttcaactgggttgtcttccaatgcctgcagcttaacttttagcggtcat
actaatgagaagaattttgtaggtttatctgtttttgatggatacatagcatgcggttca
gaaactaatgaggtttatagttatcacagaagtctacccattccaatcacttctcacaaa
tttggacctattgatcctgtccctagaagtgagattggtgatagtggaccgtatgtctca
agtgtctgttggcaaagaaagtctaacacacttgttgctgccaactcaagtggaactatg
aaattattacagatagcgtga
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