Rosa chinensis (China rose): 112182007
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Entry
112182007 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112182007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112182007
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112182007
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112182007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
112182007
NCBI-ProteinID:
XP_024176202
LinkDB
All DBs
Position
1:complement(51635274..51638244)
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AA seq
316 aa
AA seq
DB search
MKMDPENMEIVPPSDLMDDDEIHGRPRQLFTVPKPHNNGNNIPGTTSVHELLECPVCTNS
MYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCP
EIFPYYSKLKHEAVCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRY
VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYTYSL
EVGGNGRKIIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK
EQQNPEGGACIIPLCS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacccagaaaacatggagattgttccaccgtcggatttgatggacgacgac
gagatccacggccgtcctcgccagttatttacagttccaaagcctcacaacaatggcaat
aacattccgggaaccaccagtgttcatgagcttcttgaatgccctgtttgcacaaattca
atgtaccctccaatccatcagtgccataacgggcataccctttgttccacctgtaaaaca
agagtgcataatcggtgcccaacttgtagacaggagcttggtgacataaggtgtttagca
ctggagaaggtagctgaatcacttgaactgccttgcaagtactgctcgcttgggtgccca
gagatattcccatattatagtaaactgaaacatgaggctgtctgtaacttcagaccatac
aactgtccttatgccggttcagattgctctgttgttggggatattccattccttgttgct
catctacgggatgaccacaaggtggacatgcattctggatgtacttttaaccatcgttac
gttaagtctaatccccgcgaagtagaaaatgccacatggatgttaactgttttccactgc
tttggtcagtacttctgtctccattttgaagcattccagctcggtatggctcctgtttac
atggcatttctacgtttcatgggggatgaaacagaagctcgtaactacacctacagcctt
gaggttggaggaaatggccgaaagatcatatgggaaggaaatccaagaagcataagggat
agccacaagaaggttagggacagccatgatggcctcataatacagcgcaacatggcgctt
ttcttctctggtggggataggaaagagctgaagctgcgagttacaggacggatatggaag
gaacagcagaacccagaaggcggtgcctgcatcatacctctctgtagttag
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