Rosa chinensis (China rose): 112182038
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Entry
112182038 CDS
T06020
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112182038
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112182038
NCBI-ProteinID:
XP_024176234
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Position
1:51876715..51881241
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AA seq
686 aa
AA seq
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MAHSECESSSISRATADTGFGGALYTELWKLCAGPLVDVPSPGERVFYFPQGHMEQLEAS
TNQELNPQIPRFNIPSKILCRVVNIQLLAERETDEVYAQITLHPESDQSEPTSPDPCVPE
PPKPATYSFCKILTASDTSTHGGFSVLRKHANDCLPPLDMNQATPTQELVAKDLHGYEWK
FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGGNGELRVGVRRLARQQTPMPSS
VISSQSMHLGVLATASHAVMTSTLFVVYYKPRTSQFIVGLNKYLEAINNKFSVGMRFKMR
FEGEDSPERRFTGTIVGVGDLSPHWSESKWRSLKVQWDEHATVPRPDRVSPWEIEPFVAS
VPLNLAQPVVKSKRPKTVEIASSEITTNSIASPFWYQGSNQSVEPTQLGSVAEVQSSGSQ
AVWPPRQKESNGSSYSSSRICAEGIWPSSPKVNVSLSLFADSQEGNKNVSMGSTPPSFPS
PPSKPSNGPVHDQLETGKKSESSSGFRLFGYDVPNSITARFREREPMFTTVCCGAKGPIL
AAASELDQDLEISKISKEQMQVVSEMPPIETQSKQGSTVSTRSRTKVHMQGVAVGRAVDL
TALKGYDDLINELEKMFEIKGELRPANKWAVVFTDDENDMMLLGDDQWQDFCRTVKKIFI
YSSDYVQMLRQGKQKNSALVCQETEN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacagcgagtgtgagtcttcatctatttctcgtgctactgccgatacaggtttt
ggaggtgctttgtatacagagctatggaagttatgtgcagggcctctggtggatgtgccc
agtcctggagagagagtgttctactttccgcagggtcatatggaacaactggaagcatca
acaaatcaagaactgaatccgcaaatccctcggtttaatataccttcgaagatcctttgt
cgtgtggttaacattcaattactggcagaacgagaaaccgatgaggtttatgctcagatc
actttgcacccagaatcagatcaaagtgaacctacaagtcctgatccatgtgtaccagag
cctccaaaaccggctacttactcgttttgcaagattctgacagcttctgatacaagcacc
catggagggttctctgttcttcgaaagcatgctaatgattgcttgcctcctttggacatg
aaccaagcaactccaactcaggaattggttgccaaagatcttcatgggtatgagtggaaa
tttaagcatatcttcagaggtcaacctcggaggcatttacttaccacaggatggagtaca
tttgtcacttccaaaagattggttgctggtgatgcatttgtgtttttgaggggtggtaat
ggggaactacgggttggggttcggcgtcttgctcgtcaacagactcccatgccttcatca
gtgatatctagccaaagtatgcatcttggagtgcttgcaactgcttctcatgctgtcatg
acctcaactctctttgttgtctattacaagcccaggacaagccaatttattgttggatta
aacaaatatcttgaagccatcaacaataagttttctgttggcatgcgctttaaaatgcga
tttgagggggaagactcaccggaaagaagattcactggcactatagtaggggttggggat
ttatctcctcactggtctgaatctaaatggcgatctctgaaggttcaatgggatgaacat
gccacagtaccaaggccggatagggtttctccttgggagatagagccatttgtagcttct
gttccgttaaatcttgctcaaccagttgtaaagagcaaaaggcctaaaactgttgaaatt
gcttcatctgaaattaccaccaattcaattgcttcacctttctggtatcaagggtcaaac
cagtctgtcgagccaactcaattaggcagtgttgctgaagtccaaagctctggtagccag
gctgtgtggcccccgaggcagaaagagagcaatggcagcagctactctagctcaaggatc
tgtgcagagggcatctggccttcttctccaaaggtgaatgtctctttaagcctttttgca
gactcacaagagggcaacaagaatgtttctatggggtctacgccacctagcttcccctcc
cctccttcaaaacctagcaatggcccggtgcatgaccagctggaaacagggaaaaagtcc
gagtcttcttcaggttttcggttgtttggttatgatgtgccaaactcaattactgcccgt
ttccgggagagagagccaatgtttacgacagtgtgctgtggtgccaaaggacctattctg
gccgctgcatcagaacttgatcaggacctggaaatttcaaaaatctcaaaagaacagatg
caagttgtatcagagatgccaccaatcgagacacaaagcaagcagggatccactgtttca
acgagatctcgcaccaaggtgcatatgcagggtgttgctgttggtcgtgctgtggacttg
actgcattgaagggttatgatgatctaattaatgagttggagaaaatgtttgagatcaaa
ggagagcttcgtccagcaaacaaatgggcagttgtttttactgatgatgagaatgacatg
atgcttcttggcgatgatcaatggcaagatttttgccggactgtgaagaagatatttatc
tattcaagtgattacgtacagatgctaagacaaggcaagcaaaaaaattcagcattagtg
tgtcaggagactgaaaactaa
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