KEGG   Rosa chinensis (China rose): 112182042
Entry
112182042         CDS       T06020                                 
Name
(RefSeq) uncharacterized protein LOC112182042
  KO
K24155  rabconnectin-3a
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn04142  Lysosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    112182042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112182042
Membrane trafficking [BR:rcn04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    112182042
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    112182042
   RAVE complex
    112182042
SSDB
Motif
Pfam: Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EML_2 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT140_1st EIF3I
Other DBs
NCBI-GeneID: 112182042
NCBI-ProteinID: XP_024176239
LinkDB
Position
1:complement(51912467..51926352)
AA seq 2426 aa
MIRRAPKNAVLVNSAKVEAIGWTGSGDGIIASGVEVVLWRRSGRSWEIAWKFKADQPQSL
VSATWSVEGPFATAAYQSKWLIEGLLTKEASKCVLVSQRDGKSEFVKSELRHPLPVSMIQ
WRPLTGKPLSRDAKHPSRHVLLTSCLDGTVRLWCEVDDGRARKVAKDINDHKTMRWSFSV
AAVIEINQALNGILGIDIYVTWAIETGGLNKASAGAKKLFSANGYEHDQLGNCEWLIGFG
PGMLVKFWAVHCLDDVSPVRFPRVTLWKTQELQVLEGGHVHRTGLSNYNDRIPLNKVVIL
RNCMSGPPVVCSLIQLLPCNSLVWSLLYTQSSNNVEDLTLNKPGMENTLSCSADGILNLD
GHAGRILQVAVHPYSCEVELAVSLDSDGLLLFWFFSTISNYILGRPTLVPTWDICGKLAT
QSSSSRYTSVRWAPAILNEVAVLLMGHAGGIDCFVVKIHQDEEEIIECHYLCTIPFTGHG
PYEDGPNSISTIPLPPTCHETLRCSKFMLLGVWMNGFQALSWEITLHTFDLSRSYCDCDF
ETGNGPESMWGFEGTFTNVRYCLKVNACSSQIPDPYIHDEVTSFAVVCQGSLMRIEKNLG
PTIDQCSSCPAYLMATGCSDGSLKLWRSRIAKLSTPNIPWELVGMFVAHKGPISTVCLSE
CGRKIATICKDFSSNTVGTLQIWDPIHLAGAGSFVLEDTISFDQELVALNWLPLGNGQLL
LGVCMLNQFRVYSLERCGGQTLLNPEKSVKKNIWVCIASTHTFPPICDFFWGPRATAVFV
HKSYFCVNSQWLFLVDKKHLANGQSNDMAKNCMGSAGGMKEDTSSIFFDCELQQFDKTLL
DESRRDCKSGTPFKTDLKKDYLLSSLFVARSQLDCAWGTKLGLWTMLEVVENLSGSLPVY
HPEALFMNIYSGNWKRAYIALRHLNDFLSSESSSGSKHYPSKSSIFVPQILLSTFLDGII
SIDSNDKGFQWSGDAVTSSSQLQRDSGQFTYDSYASNNLFSSSSTKYGLVDFVEHLEKYE
LAAITNIERMQILAIFDLLNEMTNSNSGSAYESLDEPGQRFWIALRFQQLHFVRKFGRSV
SVEELVVDSKLIGWAYHSDCQENLFGSFLPNEPSWQEMRNLGVGFWFTNTAQLRSRMEKL
ARLQYLKRRDPKDCALLYIALNRIQVLTGLFKISKDEKDKPLVTFLSRNFQEEKNKAAAL
KNAYVLMGRHQLELAVAFFLLGGDTSSAVSICAKNLGDEQLAVVICRLAEGRGGPLERHL
ISKSLLPFAIERGDSWLASLLEWELENYCQSFISMLGLQINSATETYATLSSGVAFSDPN
VGLYCLLLATKNSMRNAVGERNTAILSRWAVFMTATALKRCGLPLEALEYLSSPTTILGD
TDLGTVSDIGDFEKLNGILNPSPKNSSNWLSSNVAFRVEFLARLDLALQYLSTLVREHPS
WADTVVAPSRAISHINECENHEHVKVLGSFRQKLYTALHHLEQKFSVVPFHLISMVLLSL
YNRGLWFVGYEILHSYTSQDPDLNKSQIVISLLHPLMHKQLLKATRETSLLFSRVIAACS
ITCSKLKSDCLENNVSGESGSSSSNAWEYYFQGLILSLRSLRSALQIISVSSTEDLIMKP
LIIIDWIEYYVQFACAWLQKNSKVLFLLMQPLLITFTNGHTPYEVDLMDLKKILPQIAES
VTQYSLIDNVCIGLQGSQGTDVAHLIPEDERWQITGACLWQHISRLMKHKIGMLSYKLDE
GCISGVPDGKHFSSVPCSENLGPDDNRTEEVIGLVSLSLVKLLKTTLAHVSSYHVMRLAS
HLQHKMDNGLHVMTLVWLEEYNQSQTRGLNQHLNQDMLKLETIGEKHGSDILWDICADPK
IISESFTQEKINWSHSLDHKPSKGWNNIYRGVTTVDETEETHNHELTPKSTSANSEAGLP
SRSLFRSGHSFLSGWQKDTTATKEVSPFLNPKEIYKRNGELLEALCLNSVNQKQAALASN
RKGIIFFNWKDDMPDRDHSDYIWSEADWPLNGWAGSESTPAPTYVSPGVGLGIKQGTHVG
LGGATVGVGSLARSARDLRGGGAFGNQGYPGMRVSGLGWETREDFEEVVDPPPTVENANT
RVFSSHPSRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHC
GHRFATAALDGTVCTWQLEVGGRSNIRPTESSLCFNSHASDVAYVTSSGSIIAVAGYSSS
SVNVVVWDTLAPPTTSRASIICHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDVGLHDF
RYIATGRSKRHRHTDKGEQAVKTSSNIDHHPADGNRFGEQNQNGMLWYIPKAHSGSVTKI
STIPNTSLFLTGSKDGDVKLWDAKRAKLVYHWPKLHERHTFLQPSSRGFGGVVQAAVTDI
KVVSQGFLTCGGDGTVKLVHLKDHQY
NT seq 7281 nt   +upstreamnt  +downstreamnt
atgattcggcgagctccaaagaatgcagtgcttgtcaactctgcaaaggtggaggcaatt
ggatggacgggctcaggggatggaataattgccagtggcgttgaggttgttctgtggaga
agaagtggtaggtcatgggaaattgcttggaagtttaaagcagaccaaccccagagtttg
gtctctgcaacttggtctgttgaaggaccttttgcaactgctgcttatcagagtaaatgg
ctgattgaaggattgttgactaaggaggctagcaaatgtgtgctagtaagccagcgagat
ggcaaatctgagtttgttaaatctgagctgcgacatcctcttcctgtctcaatgattcaa
tggaggccattaactggaaaacctttaagcagagatgcaaaacatccatcaaggcatgtg
ctactcactagttgcttagatggaactgtcaggttatggtgcgaggttgatgacggacgg
gcaagaaaagttgctaaggacattaatgatcacaaaaccatgaggtggtcattttctgta
gccgctgtaatcgagataaaccaggcactgaatgggattctgggaattgatatttatgtg
acgtgggccatagaaactgggggtctaaacaaagctagtgcgggggctaaaaaattattc
tctgcaaacggttatgaacatgaccagctcggtaattgtgagtggttaattgggttcggt
cctggaatgctagtgaagttttgggctgtacactgtctcgatgatgtgtccccagtaaga
tttccccgggttacattatggaagacacaagaactacaagtcctggaagggggacatgtt
cataggactggactttcaaattataatgatagaataccacttaataaagttgtgatcttg
aggaactgcatgtctggtccaccagtggtctgctctttgattcagttgttaccttgcaat
tcattggtttggtcactgttgtatactcaatcttcaaataatgtagaggatcttaccctc
aataaacctggtatggagaacactttatcatgctcagctgatgggatcttgaatttggat
ggtcatgctggaagaatcttacaagtagcagtacatccttatagttgtgaggttgaactt
gctgtctccttagattctgatggattgcttcttttttggtttttctctaccatttccaac
tatattttgggccgtccaacactagtgccaacatgggatatctgtgggaagcttgcaact
caaagttcatcttccaggtatacaagcgtgaggtgggcaccggcaatactaaatgaagta
gctgttcttcttatgggacatgctggaggaattgattgctttgttgtaaaaattcatcag
gatgaggaagaaattatagaatgtcactacttatgcactataccttttacaggtcatggt
ccttatgaggatgggcccaacagtatctctacaattcctttgcctccgacttgtcatgaa
actctaagatgtagtaaatttatgcttttgggtgtctggatgaatgggtttcaagctctt
tcatgggaaatcactttacatacttttgatttatccagaagctactgtgactgtgatttt
gagacgggaaatggtcctgaaagtatgtggggatttgaaggtactttcaccaatgtaaga
tattgtctaaaagtaaacgcttgctcatcgcagatacctgatccatacatccatgatgag
gttacaagttttgctgtggtctgtcagggtagtttgatgcgtatagaaaaaaatttgggt
cctactattgatcaatgctctagttgtcctgcttatttaatggcaacaggctgctctgat
ggttctttgaaattgtggaggagtagaattgctaaactatcaactcctaacattccatgg
gaacttgtgggtatgtttgtggcacataaaggccctattagcactgtatgcttgtctgaa
tgtggtaggaagattgcaaccatctgcaaggatttttcttcaaatacagttggcactctt
cagatatgggatcctatacatcttgcaggtgcagggtcatttgtgttagaagatacaata
tcctttgatcaagaacttgttgctttgaattggctacctttgggaaatggtcagttacta
ctgggagtttgcatgctgaatcagtttcgagtatattctcttgagcgttgtggtggtcaa
actttgttaaaccctgaaaaatcagtgaaaaagaacatctgggtctgcattgcctctact
catactttccctcccatttgtgacttcttttggggacccagagcaacagctgtctttgtt
cataagagttacttttgtgtaaatagtcagtggttgttccttgtagataagaaacatctt
gctaatggtcagtcaaatgacatggcaaaaaattgcatgggttctgcaggtggaatgaaa
gaagacactagttcaattttctttgattgtgaacttcaacaatttgataaaacattactt
gacgagagtagaagagactgcaagtctggtacaccattcaagactgatttgaaaaaggac
tatctattgagcagcttgtttgtagcaaggtctcaattggattgtgcttggggtaccaag
ctaggtttatggacaatgcttgaagtggtggagaatttaagtggatctctgccagtttac
cacccagaggccctctttatgaatatctattcaggaaattggaagcgcgcgtatattgca
ttgaggcatctcaatgattttctctcttctgagtcttcttctgggagcaagcattaccct
tcaaagtcgagcattttcgttccacagattttgttgtcaacttttcttgatgggattatc
tcaatagattcaaacgataaaggatttcaatggagtggtgatgcagtcacttcatcttct
cagttgcagagagactctggtcagtttacatacgactcgtatgcttccaataatttgttc
agttcatcttcaacaaaatatggacttgttgactttgttgagcatctggagaagtatgaa
ttagcagctataaccaacattgagaggatgcagattcttgctatctttgatcttctcaat
gaaatgactaattcaaactctggttctgcgtatgaaagtctcgatgaacctggacagagg
ttctggattgcattgaggtttcagcaactacattttgtccggaagtttggtagatcagta
tccgtggaggaattggttgtggactctaagttgattggatgggcctaccactctgattgc
caggaaaatttgtttggatctttcctacccaatgaaccgtcttggcaagaaatgcggaat
ttaggtgtaggattttggtttacaaatacagcacaattgcgttcaaggatggagaaacta
gcaaggttgcaatatctgaagaggagggatcctaaggattgtgcattgctatatattgca
ctgaatagaattcaagttctgaccggacttttcaaaatcagcaaggatgagaaggacaag
cccttagtcacatttctttcacgcaattttcaggaagagaaaaataaggcagctgccttg
aagaacgcatatgtcttgatgggtaggcatcaactggagttggctgttgctttctttctg
cttggaggtgatacttcttctgctgtcagtatttgtgcaaagaaccttggggatgaacag
cttgcagttgtaatttgccggcttgctgaagggcgtggtggaccattagagagacaccta
atttcaaagtctctactaccatttgcaattgagaggggtgactcctggttagcaagcctt
ctggagtgggagctagagaactactgtcaatcttttataagcatgcttggactccagata
aattctgcaactgagacgtatgcaactttgtccagtggtgttgctttttcagacccaaat
gttggtctctattgtctattgctagcaaccaagaacagcatgaggaatgctgtaggggag
cggaatactgcaatcctgagtaggtgggcagtattcatgacagccactgccttaaagaga
tgtggacttccacttgaagctttggagtacctttcatctcccacaaccattcttggagac
acagatctagggactgtatcagatattggggattttgagaagctaaatggaattctgaat
ccttctccaaagaattcttcaaattggttatcaagtaatgtggcattccgtgtggagttc
cttgccagattagatttggcacttcaatacttatcaacattggtaagagagcatccaagt
tgggcagatactgttgttgcaccttccagagctatttcacatataaatgagtgcgagaat
catgaacatgtaaaagttctggggagtttccgccagaaattatacacagcacttcatcat
ttggagcagaagttttcagtggttccttttcatctcatcagcatggtcttgctctcactg
tacaatcgtgggctatggtttgttgggtacgaaatattacattcatatacttctcaagat
ccagatctcaataaaagccaaatagttatatccctattgcatcctcttatgcataagcaa
cttttgaaggctaccagagaaacttctcttttattttcacgcgttattgctgcctgcagt
ataacttgctctaaactgaagtcagattgtttagaaaacaatgtgtctggtgaaagtgga
tcttcaagctcaaacgcttgggagtattactttcaaggtcttatcctgtcacttcggagt
ttaaggagtgctttgcaaattatttctgtctcatctactgaagacctcatcatgaaaccc
cttatcatcattgattggattgagtattatgtacagtttgcttgtgcatggcttcaaaaa
aactcaaaagttctcttcctattaatgcaaccacttctgatcacatttaccaatgggcat
acaccttatgaagttgatttgatggatctgaagaaaatcctccctcagattgcagaatcg
gtgacccaatattctttgattgataatgtatgcataggccttcagggttctcaaggtaca
gatgtagcacatttaattccagaagatgaaagatggcagatcacaggggcttgtttgtgg
caacacatatccagactaatgaaacataagataggtatgttatcttataaacttgatgaa
ggctgtatttctggtgttcccgatggaaaacatttctcatcggtgccttgctctgaaaat
ttgggtcctgatgacaacagaactgaagaagtgattgggttggtttcattgtccttggtt
aaattattaaagaccactcttgcacatgtttcttcttatcatgtgatgcgtctagcatca
catctgcagcataagatggataatgggttgcatgtaatgactcttgtttggttagaagaa
tataaccagtctcagaccagaggcctcaatcagcatttgaatcaggacatgctcaaattg
gagacaataggtgaaaaacatggatctgacatattatgggatatttgtgcagatcctaaa
ataatatctgagagtttcacgcaggaaaaaataaactggtctcactcccttgatcataaa
ccgtctaaaggatggaataacatatatagaggcgtcacaactgtagatgagactgaggaa
actcataaccatgaacttacgcctaagagtacttctgccaatagtgaagctggattacct
tctagaagtctatttcgcagtggccactctttccttagcggatggcagaaagatacaacc
gctacaaaggaggtctcacctttcctgaacccaaaagaaatatacaagagaaatggggag
cttttggaggcattgtgtctcaactctgttaatcagaaacaagctgctcttgcaagcaac
cgaaagggcatcatattttttaattggaaagatgatatgcctgatagagatcattcagac
tatatctggtcagaggctgattggccactgaacgggtgggctggttctgaatcaacgcca
gctccaacatatgtatctcctggtgttggtcttggaatcaaacaaggaacacacgttgga
ctgggtggagcaactgttggtgtaggatctttggcaaggtcagcaagagacttgagaggt
ggaggagcatttgggaatcaaggttatcctggaatgcgtgtgtctggtttaggttgggag
actcgagaggactttgaggaagttgttgatccaccacctactgttgagaatgcaaacaca
agggttttttccagtcacccatcaagacctttcttcttggttggttctagcaatacacac
atttacttatgggagtttggcaaagacaaagctactgcaacttatggagttctgcctgct
gcaaatgtccctccaccttatgctctggcatcgatatctgctttgcagtttgatcactgt
ggacacagatttgctaccgctgccttagatggaactgtatgcacatggcagctggaggtg
ggaggaaggagtaatattcgtcctacagaatcatctctatgctttaacagtcatgcatcg
gatgttgcttatgttacatcaagtggatcaatcattgctgtggcaggatatagctccagt
agtgttaatgtggtcgtatgggatacattggctccacctactacctcacgagcttccatt
atttgtcatgaaggtggggcgcgctctctttctgttttcgataatgacataggaagtgga
tctatctcaccccttattgtgactggtggtaaaggtggtgatgttggacttcacgacttc
cggtatattgctactggaaggagtaaaaggcacaggcatactgataaaggtgaacaagct
gtgaagacatcatcaaatattgatcatcatcctgcggatggtaacagatttggggaacaa
aatcagaatgggatgctgtggtatataccaaaagctcactcagggagcgtcaccaagata
tccacaattccaaataccagtttgttcttaacgggaagcaaagatggagatgttaagctt
tgggatgccaagagagctaagttagtatatcactggccaaaattgcatgaaaggcacaca
tttttgcaaccaagctctcgaggttttggtggagtagttcaggctgctgtcaccgacata
aaagttgtttcacaaggttttcttacatgtggtggagatggaactgtaaagctggttcac
ctcaaagaccaccaatattag

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