Rosa chinensis (China rose): 112182278
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Entry
112182278 CDS
T06020
Name
(RefSeq) protein RNA-directed DNA methylation 3
Organism
rcn
Rosa chinensis (China rose)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOW
KOWx_SPT5
KOW5_SPT5
zf-CCHC_3
zf-CCHC_5
SLU7_N
Motif
Other DBs
NCBI-GeneID:
112182278
NCBI-ProteinID:
XP_024176490
LinkDB
All DBs
Position
1:complement(53910492..53920615)
Genome browser
AA seq
1488 aa
AA seq
DB search
MASKEKGKAIATSGWSAAGKRKPGDDDKSGGGGRKRRNPGALQFFEHSAAEADGSDDDSD
LDDFMEEELETEPIVKSEPGKAHNLPFVPKEEDIDGDEFERMMEERYRTGSTYVTYAEDN
YENKRSVDGIVLEPSAKDPVIWKVKCAVGRERHSAFCMMQKFVDLRSMGTKLQIISAFAV
DHIKGFVFIEADKLCDVQEACKGLCNIFLSRVTPVPKNEAPHLLAPRTRNSEIAVGTWAR
VKSGNYKGDLAQVVAVNEKKKATVKLIPRIDLQAMAAKFGGGVTRKKLPTPAPRLISTNE
LEEFRPLIQDRKDKDTGLRFLCLDGLLLKDGYLYKKMPLDSLNCWGVMPSEEEILKFKPS
ENNESADLEWLSQLYGDNKKRKSIGSDKGDGKGEGSAGCGGKGEGSSKGNGKGEGPSGGK
EGSSGFAGKGEGSSGCGGNLYELYDLVCFGKKDFGLVLGIEKDDTYKILKEGVEGSTVVT
VQQNEIKNVLSDVKFTALDQRLKPICVNDTVKVLEGPLKDRQGIVKLVYRGTIFMFDENE
TENGGYFCSKSQMCEKIKLSIDVIPEKDGDSGAFGFEDFTSSPKSPLSPKKPWLGRENNF
NQGDTDGMFSIGQTLRIRVGPLKGYLCRVLAIRRSDITVKLDSQQRVLTVKAEHLTEVRV
KSAAMLSEDPESSSLKPFDLLGTEGGSKDWTDGAGTSAGGDGWNVGGSSGERNAWPSFSA
SGNLLQPESSSANPFESDGNGAKKEDSSWERNVAPNNNSSWGVAAAENKDQVAGRGKSNS
WGTKVGDDSTSSDTWQKASEPASSSWGVAAAVNNKDQGNGWGKSDSWGAKVGGDSSLSDT
LQKASEPASSSWGVAAAVDNKDQGTDWGKSDSWGAKVGGDSTSSDTWQKASAPASSSWGV
AAAIDKKDQGIGWGGKTGCDGTASDSWKKASEPASNSSWGVAAAADNKDQGSVWGGSGSQ
KPSVADDSGDKGSAWNKPAEGSWSKQTGGSSWGKQADWSTKEGSSTGDAGWKSSTPSVEN
QTGSRGNAGGWAKAQGISGNENHKDSWKKPSGIDDNKNASWIKEDGGSTWNKQDGGSTWN
KPAGGSWSKGGDQGSGGGYGGGGRGGGGGNCFKCGESGHMSRECPQGGGGGRGAGGGNCF
KCGESGHMSRECPQGGSGGRGAGGGNCYKCGESGHMSRECPQGGGGGGRGSGGGAGNCFK
CGESGHMSRECPQGGGGRGAGSGNCFKCGESGHMARDCSQGGGSYGNFGGGAKSTDSWSK
RAWGTGDGGSGGDGAKPAASSWGTTDGGSGFGGGAKPTDSWSKRAWGTGDGGSGSGGPKP
AASSWGTNGGSGGAGGEAKPAASSWGKGDGGSGGHSDEAKPAASTWGTGSSWGKADGGSG
RASGEAKPAASTWGTGSSWGKGDGGSGGAGGEAKPAASTWGKGDGGSGGDGGEAKPADPW
SKPSASAWGKGDGGSGGASGEAKPADPWSKPSASAWGKKDGGSGSGGW
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaaggaaaaagggaaggcgatcgccacaagcggatggtccgccgccggcaag
cggaagcccggcgatgatgacaagtccggcggcggcggtcggaagcggagaaaccccggc
gctctccagttcttcgagcactccgccgccgaagctgacggttcggacgacgacagcgac
ttggacgattttatggaagaagaacttgaaacagaacctatagtcaagagtgaaccgggg
aaagcccataaccttccatttgttcccaaagaggaggatatcgatggggacgaatttgaa
agaatgatggaagaacgatacaggactggttctacatatgttacctatgctgaagataat
tatgaaaacaaaagatcggttgatggaattgtgcttgagccttctgctaaagatcctgtt
atctggaaagtaaagtgtgcggttggacgcgagagacactcagctttctgtatgatgcag
aagtttgttgacttacgatcaatgggtaccaagctgcagataatatctgcatttgctgtt
gatcacatcaagggttttgttttcattgaagctgataagctatgtgacgttcaggaggca
tgtaaaggactttgtaatatatttttatcccgagtaacgccagttcccaaaaatgaagct
cctcatttactggctcctcggactagaaacagtgaaattgctgtgggtacatgggcccgt
gtgaagagtgggaactacaagggtgacttggcacaggttgtggctgtgaacgaaaagaaa
aaagcaacagtaaagctgataccaagaattgatctacaagcaatggctgcaaaatttggt
gggggagttactagaaagaaactgcctactccagcaccaagattgatcagcacaaacgaa
cttgaggagttccgccctctcattcaggacaggaaggataaggataccggattgcgtttt
ctctgtcttgatggtttgctccttaaggatggatatttatacaaaaaaatgccattagat
tcattaaattgctggggtgtcatgccatcagaagaggagatactgaaattcaagccttct
gagaacaatgaatctgctgatctggagtggctttcgcagctttatggtgacaataagaaa
aggaagagcatcggcagtgataaaggggatggcaaaggagaaggttcagcagggtgtggt
gggaaaggagaaggttcatcaaagggtaacgggaaaggagaaggtccttcaggtgggaaa
gaaggttcttcagggtttgctgggaaaggagaaggttcttcagggtgtggtgggaatctc
tatgagctgtatgatcttgtttgtttcggcaagaaagattttggtcttgtgctaggcatt
gagaaagatgatacttacaagattctgaaagagggtgtggaaggatctactgttgtgaca
gttcagcagaatgagataaagaatgtactttctgatgtaaaatttacagctttagatcag
cgcctgaagcccatttgcgtcaatgatacagttaaagttttggaaggaccattgaaggat
aggcaaggaatagtgaagctagtctacagaggcacaatattcatgtttgatgagaatgag
acagaaaatggtggttatttctgctcaaaatctcaaatgtgtgagaaaatcaagctttcc
attgacgttatcccagaaaaggatggggattcgggtgctttcggttttgaagatttcaca
tcatcacctaaatcccctctatcgccaaaaaagccttggctaggaagggagaataacttc
aatcagggcgatactgacggaatgttctcaatcggtcaaactttaagaattcgtgttggt
ccattaaagggatacctctgtcgtgtcttggccatacgccgttctgatatcacagttaag
cttgattctcagcaaagggttcttacagttaaagctgagcatcttacagaggttcgtgta
aagagcgctgccatgcttagtgaggatccggagtccagctctcttaaaccatttgattta
cttggaactgaaggaggctctaaagattggacagatggagctgggacatcagccgggggt
gatgggtggaatgttggagggtcatctggtgaaaggaatgcttggcctagtttctctgcc
tcgggcaatttgcttcagcctgagtccagctctgcgaatccttttgaatctgatggaaat
ggtgctaaaaaagaggatagttcttgggagaggaacgtggctccaaataacaactcatcc
tggggtgttgcagcagcagaaaacaaggatcaagttgctggccggggaaaaagcaactct
tggggcactaaagttggagatgacagcacttcgtcagatacttggcaaaaagcatcagaa
cctgccagttcatcctggggtgttgcagcagctgtaaataacaaggatcaaggtaatggc
tggggaaaaagcgattcttggggcgctaaagttggaggtgacagcagtctgtcagatact
ttgcaaaaagcatcagaacctgccagttcatcctggggtgttgcagcagcagtagataac
aaggatcaaggtactgactggggaaaaagtgactcttggggcgctaaagttggaggtgac
agcacttcgtcggatacttggcaaaaagcatcagcgcctgctagttcatcctggggtgtt
gcggcagcaatagataagaaggatcaaggtattggctggggtggtaagactggatgtgac
ggcactgcatcagatagttggaaaaaagcatcagaacctgctagtaattcgtcctggggt
gttgcagcagcagcagataacaaggatcaaggttccgtctggggcggtagtggtagtcaa
aaaccgagtgttgcagatgatagtggtgacaaaggttctgcttggaataagccagctgaa
ggttcttggagtaaacaaactggaggatcctcatggggtaagcaagccgattggagcact
aaagagggatcaagtactggtgatgcagggtggaaaagttcaacgccttcagtagagaat
cagactgggagcaggggtaatgcaggtggctgggcaaaagctcaaggcatatctggtaat
gagaatcataaagacagttggaagaaaccaagtggtatagatgacaataaaaatgcttcg
tggatcaaggaagatggaggttctacctggaataaacaagatggaggttctacttggaat
aagcctgctggaggttcttggagtaaaggtggggatcaagggtctggtggtggctatggt
ggtggtggtagagggggtggaggtggtaactgtttcaagtgcggtgagtctggacatatg
tcaagggagtgccctcagggcggcggtggtggtcgaggggcaggaggtggtaactgtttc
aagtgcggtgagtctggacacatgtctagggagtgccctcagggcggcagtggtggtaga
ggggctggaggtgggaactgttacaagtgtggtgagtctggacacatgtctagggagtgc
cctcagggtggcggcggtggtggtagagggagtgggggtggggctgggaactgtttcaaa
tgtggtgagtctggacacatgtctagggagtgtcctcagggcggcggtggtagaggggct
ggaagtgggaattgtttcaagtgtggtgagtctggacacatggctagggactgctctcag
ggaggtggtagctatggcaacttcggtggtggagcaaagtccactgattcatggagcaag
cgtgcttggggtactggagatggtggaagtggcggtgatggagcaaaaccagcagcaagc
tcttggggtaccacagatggtggaagtggctttggtggtggagcaaagcccactgattca
tggagcaagcgtgcttggggtactggagatggtggaagtggcagcggtggaccaaaacca
gcagcaagctcttggggtacaaatggtggaagtggcggagctggtggtgaagcaaaacca
gcagcaagctcttggggtaagggggatggtggaagtggtggacatagtgatgaagcaaaa
ccagcagcaagcacttggggtacaggaagctcttggggtaaggcagatggtggaagtggc
agagctagtggtgaagcaaaaccagcagcaagcacttggggtacaggaagctcctggggt
aagggagatggtggaagtggcggagctggtggtgaagcaaaaccagcagcaagcacttgg
ggtaagggagatggtggaagtggcggagatggtggtgaagcaaagcctgctgatccatgg
agcaagccatcagcaagtgcttggggtaagggagatggcggaagtggcggagctagtggt
gaagcaaagcctgctgatccttggagcaagccatcagcaagtgcttggggtaagaaagat
ggtggaagtggcagcggagggtggtga
DBGET
integrated database retrieval system
