Rosa chinensis (China rose): 112182366
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Entry
112182366 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112182366
KO
K19022
AP-5 complex subunit beta-1
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112182366
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
112182366
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
112182366
NCBI-ProteinID:
XP_024176617
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All DBs
Position
1:54501130..54505688
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AA seq
1117 aa
AA seq
DB search
MTDKPPEPSLSPPSKPVTLQDWESLIDDFQHGGARRHRWTSAYPILIDQALSCLNRREFP
LKLQLIVFLEEFSDPLFTSDPDSLPKTLHRLIETLRALIQTPADGVHVTLALKEQTMLSV
TAIVIAADYMLDGLVELLLTVANRPNHGVDRQARAVACECLRELEKSYPCLLSDIGGHLW
SLCQSERTHAAQSYILLFTTVVHNIVAKKLGVSILNTTVPLVPFTAPQVLVNGSGKEGSG
GLNYKELRRAMSFLLEWPQVLTPCGMVEFLALIMPVAMALELQASMLKVQFFGMIYSSDP
LLCHVVLTMYRPFLDAFDGQEGQIASRLMLLSRETQQQLVFRLLGLHWLLGFSELVLSRE
VRKVKGIVDMGLRFYPSVFDPLALKALKLDLLAFCSICVDMLKLEGVSGEDTGNDKLVVK
VFQDGLVSVSAFKWLRPDSTETAVAFRSLHRFLIGASAHLDNDPSTTRSLMDSTTFTSIQ
GILVDLMLECRRLVPVIVALTDRLFGCQKHRWLGERLLQTFDQHLLPKVKLDYTLVACFP
IFDKIAESDTIPPRGLLELLTKFMAFLVVKHGPYTGLRSWSQGSRVLGICRTFLMHHHSS
RLFLRLSHLFAFTCLYFPDLEVRDNARIYLRLLICVPGKKLRDMLNLGEELGISPSALPS
FNIQSPLSADNLKKSRSISSYVHLERVIPLLVKQSWSLSFSSFGFGNHESGYPEGIRDSE
PIIEESDIDSSSTMQITPESERIDRPQEPLRVMDAKISEILVTLRRHFSCIPDFRHMPGF
KVRISCCLRFESETLSRIWGLDSPTGVLDELDALPALYATVLNFSSSAPYGSIASYHIPF
LLGEPPRKTDISDQAAALAIVSVENDSREEDSFRAPVMIELEPREPTPGLIDVSIETNAE
NGHIIRGQLHSITIGIEDMFLKAVIPPDVPEVASAGYYLDLFNALWEACGNSNTGRETFP
LKGGKGVAAIAGTRSVKLLEVPASSVIQATERYLAPFVVSVIGEPLVSAVREGGIIRDVI
WRDEASDSALDITTSGTEFDRGPLHLTYNDDVDERDSVVNTRKKNMGCFLILIFLPPRFH
LLFQMEVCDVSTLVRIRTDHWPCLAYTDDYLEALFLA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagccaccggagccgtccctatcgccgccgtcgaagcccgtcacgctccaa
gactgggagtccttaatcgacgatttccagcacggcggcgcacgccgccaccggtggacc
tccgcgtacccaatcctcatcgaccaagccctctcttgtctcaacagacgcgaattccct
ctcaagctccagctcatcgtcttcctcgaagagttctccgacccgctcttcacatccgac
ccggactccctccccaaaaccctccaccgcctcatcgaaaccctccgcgccctgatccag
acccccgccgatggcgtccacgtcaccctcgcgctcaaggagcagaccatgctctccgtc
accgcgatcgtcatcgccgccgactacatgctcgacggcctggtcgagctgctgctcacg
gtcgctaaccgccccaaccacggcgtcgaccgccaggcgcgtgccgtcgcgtgcgagtgc
ctgcgcgagttggagaagtcgtacccgtgcctgctctccgatatcggcggccatctttgg
agtctgtgccagagcgagaggactcacgccgcgcagagctacattctcttgtttacgacc
gtcgttcataacatcgtcgccaaaaagctcggcgtttcgattctgaatacgacggtgcct
ctggtgccgttcactgctcctcaggttttggtgaatggctccgggaaggagggttccggt
gggttgaactacaaggagctgaggagggctatgtcgtttttgctggagtggccgcaggtg
ttgacgccgtgtgggatggttgagttcttggctttgataatgccggtggccatggcattg
gagctgcaggcttcaatgctgaaggttcagtttttcggaatgatttattcctctgatcct
ttgctttgccatgttgttttgacaatgtaccggccgtttttggatgcgtttgatgggcag
gaggggcagattgcgagccggcttatgctgctttcgagggaaacgcagcagcagttggtg
tttagattgctggggttgcattggttgttgggtttcagtgagttggtgttgagtagagaa
gtgaggaaagtgaagggcattgttgatatggggttgagattttatcccagtgtgtttgat
ccactggctttgaaagcgttgaagcttgacctgcttgccttttgctccatttgtgttgat
atgttgaaattagaaggtgtttcgggtgaggacacggggaatgataagttggtggtgaag
gtgtttcaagatggacttgtttctgtatctgccttcaaatggttacgtccagacagcacg
gaaactgcagtagcatttcgaagcttgcataggttcttgattggggcatcagctcattta
gacaatgatccttcaaccactagaagtctcatggactccaccaccttcacttccatacag
gggatactggtggacctgatgttggagtgtcggagattggttccagtgattgttgcttta
actgatcgcttgttcggttgtcaaaagcaccgttggttaggagagcgtctgctgcagact
tttgatcagcatttgcttccaaaagtcaaattggattatactttggttgcttgcttccca
atatttgataaaattgctgaatctgatacaattcctcctcgaggattgctagagctgctt
accaagttcatggccttccttgttgtcaaacatggcccatatacaggactgaggtcatgg
tctcagggaagcagagttcttggcatctgtcgaacctttctgatgcatcaccacagctct
agattattcctcagattatctcacctttttgcattcacttgcctttactttcccgatttg
gaggttcgcgacaatgcaaggatctaccttcggttgctgatctgtgtaccaggaaaaaag
ctcagggacatgctaaatcttggggaagaactcggtatttcaccatcagcacttcccagt
tttaatatccagtctcctctgtctgctgacaatcttaagaagtctaggagcatctcctcg
tatgtccaccttgagcgcgtgattcccctacttgtcaaacagtcttggtccttgtctttt
tcatctttcggtttcgggaatcatgaatctggttacccagaaggcatcagagacagtgaa
cccataatagaggagagtgatattgatagcagtagtaccatgcaaattaccccagaatct
gaaagaattgatcgaccacaggaaccattgcgtgtcatggatgcaaagatttcagagata
ttagtaacgttaaggaggcatttctcatgcattcctgatttcagacatatgccaggattt
aaggttagaatatcatgttgtttgaggtttgaatcagagactttatctcgtatatgggga
cttgattcccctactggtgtgttggatgagttagatgccctccctgctttatacgcaact
gtgctaaacttttcatcgtctgcaccgtatgggtctattgcatcatatcatatacctttt
cttcttggtgaacctcccagaaaaactgatatatcagatcaagcagccgctttagctatt
gtttctgtagaaaatgattctcgagaagaggatagcttcagagctccagtaatgatagaa
ctggaaccacgggaacctactcctggtctgattgatgtttccattgaaacaaatgcagaa
aatggtcatataatccgtggtcagcttcacagtatcactataggaatagaggatatgttt
ctcaaggctgttataccacctgacgtcccagaagttgcctcagctggttattacttggac
ttgttcaatgctctttgggaggcatgcggtaattccaacactggacgggagaccttccca
ttgaaaggagggaaaggggttgcagctatagctggaacccgttcagtcaagctacttgaa
gttcctgcatcttctgtgattcaggcaactgagcgctacttggcaccatttgttgtaagt
gtgattggcgaaccacttgttagtgctgttagagagggaggaatcattagggacgtcata
tggagggatgaggcctccgattctgcacttgatattactacctccggtactgagttcgat
agaggtcctcttcatcttacgtacaatgatgatgtagacgaaagggacagcgttgtcaat
acccgtaagaaaaacatgggctgcttcctcattttgatatttctacctccaaggttccat
ctcctcttccaaatggaagtgtgtgatgtttcaacattggtacgaattcgaaccgaccac
tggccgtgcctagcttatacggatgattatttggaagctttatttttggcatag
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