Rosa chinensis (China rose): 112182462
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Entry
112182462 CDS
T06020
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112182462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112182462
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112182462
03012 Translation factors [BR:
rcn03012
]
112182462
04131 Membrane trafficking [BR:
rcn04131
]
112182462
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112182462
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112182462
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112182462
Translation factors [BR:
rcn03012
]
Eukaryotic type
Elongation factors
112182462
Membrane trafficking [BR:
rcn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112182462
Exosome [BR:
rcn04147
]
Exosomal proteins
Proteins found in most exosomes
112182462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
AAA_22
Motif
Other DBs
NCBI-GeneID:
112182462
NCBI-ProteinID:
XP_024176724
LinkDB
All DBs
Position
1:complement(55267152..55269763)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATSPKYSKARYDEIVKEVSSYLKK
IGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFAPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
NEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKAVEKKDPSGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagtttcatatcaacattgtggttattggccatgttgactctgggaag
tcgaccaccaccggtcatttgatctacaagcttgggggtattgacaagcgtgtgattgag
aggttcgagaaggaggctgctgagatgaacaagcgttcattcaagtatgcttgggtgctt
gacaagctgaaggctgagcgtgaaaggggtattaccattgacattgctctctggaagttt
gagaccaccaagtactactgcactgtcattgatgctcctggacatcgtgacttcatcaag
aacatgattactggaacttcccaggctgattgtgctgtcctcattattgactctaccact
ggaggttttgaggctggtatctctaaggatggtcagacccgtgagcatgctctccttgct
ttcacccttggtgttaggcaaatgatttgttgctgcaacaagatggatgctaccagtcct
aagtactcgaaggcaaggtatgatgaaatcgtgaaggaagtgtcatcctatctgaagaag
attggatacaacccagacaaaattgcttttgttcccatctctggatttgagggtgacaac
atgattgagaggtccaccaacctcgactggtacaagggtccaacccttcttgaggccctt
gacatgatcaacgagcccaagaggccctccgacaaacccctccgacttccacttcaggat
gtctacaagattggaggtattggaactgttcctgttggacgtgttgagactggtattatc
aagcctggtatggttgtgacttttgctcccactggattgaccactgaagttaagtctgtg
gagatgcaccacgaggctctccaggaggctcttcccggtgacaatgttggcttcaacgtc
aagaacgttgcagtcaaggatctcaagcgtgggtatgttgcttcaaactccaaggatgat
ccagccaaggaagcagctaacttcactgcccaggtcatcattatgaatcaccctggccag
attggaaacggttatgctcctgtgcttgattgccacacctctcacattgctgtcaagttc
aatgagattttgaccaagattgacagacgttctggcaaggagctagagaaggagcccaag
tttttgaagaatggtgacgcagggtttgttaagatgattcccaccaagcccatggtcgtt
gaaactttctctgagtatcccccacttggtcgttttgctgtgagggacatgcgccagacg
gttgctgtgggagtcatcaaggctgtggagaagaaggatcccagcggagccaaggttacc
aagtctgcagccaagaagaagtga
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