Rosa chinensis (China rose): 112182548
Help
Entry
112182548 CDS
T06020
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112182548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112182548
Spliceosome [BR:
rcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112182548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
112182548
NCBI-ProteinID:
XP_024176819
LinkDB
All DBs
Position
1:complement(56068709..56073346)
Genome browser
AA seq
828 aa
AA seq
DB search
MEKEKSSKRFRDERDRRDRDRDRDRDHHKHRSGRDASDDHHRQHRARSDRDSKPERSHDH
RSRRDRSPEPRDDREASRDHRERSYEREGSRERSRHREVKRERSEEGEDMVERRHKRKER
ERSEGRDGGVDESEDSKRARGLDERKRFDDRRVKEEEDAGELEGNVIHSEVKVKKEELED
DEGFTTTQNGGAPVGNGASLDSTMESRVVPETSPPPSHPHPTKVYSISTTNENKGVSITR
SHEVHGKSSTDGTSSTAGRSGNLPPGELDKIKNLLAKRKELADKLNKTKLDKAAKAISDA
SANLGLKDGMQPPSASTGMLHPPVPSTISGTSGMTGLTGEKYEAVKLAQERAARMGFRHD
PEFAPVINLFPGQVATDVVPPQKPTKAPVLRLDALGREIDEHGNVVNVTKPNNLSTLKVN
INKQKKDAFQILKPEVDMDPESNPFFDPKMGINMTKIMRPKRMNFQFVEEGKWSRDAEHM
KLKSKFGELQAKEHRAKQAQLAKAKAAPDTNPNLIEVAERVITKEKPKDPIPEVEWWDVS
FLQSGTYGELVDGRIPEDRLKLDKITIYVEHPQPIEPPVEPAPPPPQPLKLTKKEQKKLR
TQRRLAREKDKQEMIRQGLIEPPKSKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQ
AHIDRNIARKLTPAERREKKERKLFDDPNNVDTIVSVYKINDLSHPKARFKIDVNARENR
LTGCAVISDGMNVVAVEGGSKSIKRYAKVMLRRINWAEAVKEEEDDEEENDDKPPNKCVL
VWQGSVARPSFNRFLVHECMTEAAGRKFFADAGVAHYWDLAVNFADDD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagaaatcgagcaagcgcttccgagacgaacgcgaccgacgagaccgagac
cgagaccgggaccgggaccatcacaagcatcgcagcggccgcgacgcttccgatgaccac
caccgccaacaccgcgctcgatcggaccgcgattcgaagccagagcgctcccacgaccac
agatctcgccgtgacaggtcgccggagccgcgggacgaccgggaagcgtcgcgcgaccac
cgcgagcggtcgtacgagagggaagggagtagagagaggtccaggcatcgcgaagtgaag
cgggagaggtcggaggagggagaggatatggtggagaggaggcataagaggaaagagagg
gagaggagtgagggtagagatggcggtgtggatgagtctgaagattctaagagagctagg
ggtttggatgagaggaagcgatttgatgaccgccgagtaaaggaagaagaggatgctgga
gaattggaagggaatgtgattcacagtgaggttaaggttaagaaagaagaattggaggat
gatgagggcttcactaccacccaaaatgggggtgctccggtgggtaatggtgccagtctg
gattctactatggaatcaagggttgtgcctgagacctctcccccccctagtcatccccat
cctaccaaggtatattcgatttctaccacaaatgaaaataagggagttagtattaccaga
tctcatgaggttcatggaaaatctagtacagatgggacatcttcaactgctggaagaagt
ggaaatctacctcctggtgagttagataaaattaagaatcttctggcgaaacgtaaggaa
ttggctgacaagctgaacaaaacgaagttagacaaagcagccaaagctatttcagatgct
agcgcaaacttgggattgaaggatgggatgcaacctccatctgcaagtacaggaatgttg
catccccctgtgccatcaacaattagtggtacaagtggaatgaccggtctgactggtgaa
aaatatgaagctgtaaaacttgcacaggagcgggctgccaggatgggctttcgccatgac
ccagaatttgctcctgttataaacttgttcccaggacaggtggcaacagatgttgttccc
cctcagaagcctaccaaggcccctgttcttcgacttgatgccctcggaagggaaatagat
gaacatggaaatgtggtcaatgtgactaaaccaaacaacctcagcactttaaaggtcaac
attaacaaacagaagaaagacgcattccaaattcttaaacctgaagtcgatatggatcct
gaatcaaatcctttttttgacccgaagatgggcattaatatgacgaagattatgaggcca
aagaggatgaacttccagtttgtagaggaagggaagtggtcaagagatgctgaacatatg
aagttgaagagtaaatttggggaattacaagcaaaagagcatagggcgaagcaggcccag
ttggcaaaggcaaaggcagcacctgatacaaatccaaatttgatagaggtagcagaaaga
gtcatcaccaaagaaaaaccgaaggatccaattcctgaagttgagtggtgggatgtgtcc
tttttacaatctggtacttatggtgagcttgttgatggtagaatacctgaagacagatta
aagttggacaaaatcaccatctatgttgaacatcctcagcccattgagccccctgtggag
ccagctcctccgccacctcaaccattaaagttgaccaagaaagagcagaaaaaactacgc
acacagcgtcgtcttgctagagagaaagataagcaggagatgattagacagggtctgatc
gaaccccccaagtcaaaagttaaaatgagtaatttgatgaaagttcttggctccgaagca
acccaagatccaaccagactggagaaggagatccggagtgcagctgctgaacgtgaacaa
gctcatatagacaggaatattgcccgcaagctcacacctgctgagcgccgtgagaagaaa
gagaggaagctttttgatgatccaaataatgtggataccatagtctcagtttataaaatc
aatgatctatctcatccaaaggcccgctttaagattgatgttaatgccagagagaatcgg
ctgactggatgtgctgtgatctcagatggtatgaatgttgtggctgttgaaggtggaagc
aaatctatcaaaaggtatgcaaaggtcatgcttcggcgcataaactgggctgaggctgtg
aaagaggaggaagacgatgaagaagaaaatgatgataagcctcctaacaagtgtgtcttg
gtgtggcaaggaagtgttgccaggcctagtttcaatagatttttggttcatgaatgcatg
actgaagctgctggtcgaaagttctttgctgatgctggcgttgctcattactgggatctg
gcagtcaactttgcagatgatgactag
DBGET
integrated database retrieval system
