Rosa chinensis (China rose): 112182562
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Entry
112182562 CDS
T06020
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112182562
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112182562
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112182562
NCBI-ProteinID:
XP_024176839
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Position
1:56231815..56238295
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AA seq
357 aa
AA seq
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MTSLPYADVDSHLKAMAGRAEGFGRFAIGGLHGPVYFVTTLADDGPGSLREGCRKQEPLW
IVFEVSGTIILSSYLSVSSYKTIDGRGQRVKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFHQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GTKKKTFEYYTEKAADREVAKSGLIRSEGDVFLNGAQPCTLTGFSEECMFHPSEFYPLWT
MEAASDSLKGVLHILTGWQSIHRPPVEQLRGRQLLGGNDEDAVELTEVEVPWNKSDK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctaccgtatgctgacgtggattcccatctgaaagcaatggccggccgggcc
gaggggttcggccggttcgctatcggaggcctacacggcccggtttatttcgtcaccaca
ttggcagatgatggtccaggctcacttcgtgaaggatgccggaaacaagaaccactttgg
attgtctttgaggtttcaggcaccattattctctcttcttacttaagtgtgtcatcttac
aagacaattgatggccgagggcagagagtaaagctcacaggcaagggccttagactgaag
gaatgtgaacacataatcatatgcaaccttgagtttgaaggtggtagaggacatgatgtt
gatggcattcagataaaaccaaattccaggcatatatggattgaccgatgcagccttcgt
gattatgatgatggactcatagatatcacccgacaaagtacagacataactatttctaga
tgttacttccatcaacatgacaagacgatgcttattggagcggacccttcacatgttggt
gacagatgcattcgggtcactattcatcattgtttttttgatgggacaaggcaaaggcaa
cctcgtgttagatttgggaaagttcatctttacaacaattacactcgtaactggggtata
tatgctgtttgtgccagcgtagaatcccagatatactctcaatgcaacatatatgaagca
ggaacgaagaagaagacgtttgaatattatacagaaaaggctgcagacagagaagtggcg
aaatctggcctcataagatctgagggggacgtattcctgaatggagcccaaccatgcaca
ttaacagggttcagtgaagaatgcatgttccatccaagtgaattttatccactttggact
atggaagcagcctcagattctcttaaaggtgttctccacattcttacgggttggcaatcc
attcataggccaccagtagagcagctgagagggaggcagctcctcggaggtaatgatgaa
gatgctgtagaactgactgaggtagaagtcccgtggaacaaatcggacaagtaa
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