Rosa chinensis (China rose): 112182616
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Entry
112182616 CDS
T06020
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112182616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112182616
04147 Exosome [BR:
rcn04147
]
112182616
04090 CD molecules [BR:
rcn04090
]
112182616
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112182616
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112182616
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112182616
CD molecules [BR:
rcn04090
]
Proteins
112182616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
112182616
NCBI-ProteinID:
XP_024176888
LinkDB
All DBs
Position
1:56577046..56584594
Genome browser
AA seq
1409 aa
AA seq
DB search
MMINRGLFGWSPPHVQPLTPVSEVSEPPESPSPYMDMSGDTSAQPVEQEEEMEEPEEIEP
PPAAVPFSRLFTCADRLDWVLMTVGSLAAAAHGTALVVYLHFFAKIIHVLWIEKGSGEPP
PMHMPPEQYQKFMDLALSIVYIAVGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQD
MSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWQIAAIT
LATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIGTLYAFTNETLAKYSYA
TSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTGGQAHGGEIITALFAV
ILSGLGLNQAATNFYSFDQGRIAAYRLFEMIQRSSSNVNHEGTILVAVQGNIEFRNVYFS
YPSRPEIPILSSFYLSVPAKKAVALVGRNGSGKSSIIPLMEQFYNPTLGEVLLDGENIKN
LNLEWLRSQIGLVTQDPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFITSLERSYE
TQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERTVQEALDLLMLGRS
TIIIARRLSLIRNADYIAVMEEGQLVETGTHEELITHDGLYAELLRCEEAAKLPRRMPVR
NYKETTAFQIEMDSSASNSFQEPSSPKMMKSPSLQRVTGIFRMGDVNFNAQDSPKPKSPP
VEKVVENGQQPLDTADKEPSIKRQDSFEMRLPELPKIDVQSANQQTTNGSDPESPVSPLL
TSDPKNERSHSQTFSRPHSHSDDVPIKVKGAKSTHYKKSPSFWRLAQLSFAEWLYAVLGS
IGAAIFGSFNPLLAYVIALVVTAYYRGDEGRHLRQEVDKWCLIIACMGIVTVVANFLQHF
YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSI
FIQDSAAIIVAVLIGMLLQWRLALVALATLPVLTISAIAQKLWLAGFSRGIQEMHRKASL
VLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFFHGMAIGFAFGFSQFLLFACNAL
LLWYTAYSVKQGYMNLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRV
PKIEPDESSAMKPPNVYGSLELKNVDFCYPTRPELLVLSNFSLKVNGGQTVAVVGVSGSG
KSTIISLIERFYDPVAGQVMLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR
HNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPIL
LLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGS
HDSLMSKNGLYVRLMHPHFGKGLRQHRLV
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaatcggggcctgttcgggtggtccccgccgcacgtacagccgctgaccccg
gtgtctgaggtctccgagccgccggagtcgccgtcgccgtacatggacatgagcggggac
acgtcggcgcagccggtcgagcaggaggaggagatggaggagcccgaggagatcgagccg
ccgcccgccgccgtgccgttttcgaggctgttcacctgcgccgaccgcctcgattgggtt
ttgatgaccgtcggatcgctggcggccgccgcgcacggcacggcgctcgtggtgtacttg
cacttttttgctaagattattcatgtgctttggatcgaaaagggttctggagaaccgccg
ccgatgcatatgccgccggagcagtaccagaagtttatggatcttgctttaagcattgtt
tatatcgctgtgggtgtttttgctgctggttggattgaggtctcatgctggattctgact
ggagaacggcagactgctgtcatcaggtcaagatatgttcaagtattacttaaccaggat
atgagtttttttgatacctatgggaacaatggggacatcgtgagccaagttttgagtgat
gttctactcattcagtctgctctcagtgaaaaagttggaaattatattcataacatggcg
acatttttcagtgggctcattattggattcatcaactgttggcagattgcggctataaca
ttagccactggtccatttattgttgctgctggaggaatatcaaatatatttcttcacagg
cttgctgagaatattcaagatgcatatgctgaagcagctagcattgctgaacaggcagtc
tcttacattgggacattatatgcatttacaaatgaaacattggccaagtattcttatgca
acatcactacaagcaactcttcgatatggtatattgattagtctggtgcaaggactagga
cttggatttacatatgggcttgccatttgttcatgtgccttgcaactctgggttggaagg
ttcctggttactgggggacaagctcatggtggtgaaattataacagctttatttgctgta
atattaagtggccttgggctaaaccaagcagcaacaaacttctactcatttgatcaaggt
cgaattgcggcttatagactgtttgagatgatacaaagatcatcctctaatgttaatcac
gagggaactatcctagtggctgtacaaggaaatattgagttccggaatgtgtatttcagt
tatccatctcgtccggagattcctattttgagtagtttttacctctctgtacctgctaag
aaagctgtggcactcgtgggtagaaatggatctggaaagagcagtatcattccccttatg
gagcagttttataatccaacattaggagaagttcttttggacggagaaaatataaaaaac
ctgaatttggaatggctcagaagccagatagggctagtcacacaagatcccgccttgtta
agtttgagtataagagataatattgcttatgggcgggatgcgacaatggatcaaattgaa
gaagctgctaaaatagcacatgcacatacatttattacttcgcttgagagatcgtatgaa
acacaggtaggaagggcaggattagcactgacagaagagcaaaaaataaaactttcaatt
gccagggcagtacttctgaatccatcaattcttctgcttgatgaggtcactggtggactt
gattttgaagctgaaagaactgttcaagaggctctagatctcctcatgttgggacgttca
actataattatagctcggcggcttagtcttataaggaatgctgattacatagctgtgatg
gaggaaggtcaactagttgaaacgggtacacatgaagagttaataacccatgatggccta
tatgcagagcttctcaggtgtgaagaagctgcaaagcttcccaggagaatgccagtgcgg
aattacaaggagactacagctttccaaattgaaatggattcttcagcaagtaatagcttc
caagaaccatcatccccaaaaatgatgaaatcaccctcacttcagagggttaccggtata
tttcgaatgggtgatgtcaattttaatgcacaggactcaccaaaacctaagagtccacca
gtagagaaagtggtggaaaacggtcagcagcccttggatacagcagataaggaaccatca
ataaagcggcaggatagttttgaaatgagactaccagagctacccaagattgatgtccag
tctgcaaatcaacaaacaacaaatggttcggaccctgaatcccctgtttcaccccttttg
acatctgatccgaaaaatgaacgttcccattcacaaacctttagccgccctcatagccat
tctgatgatgttcccatcaaagtgaagggagcaaagagtacacattataaaaagtcacca
tcattttggaggcttgcacagctttcttttgcagagtggctttatgctgtgttaggaagc
attggtgctgctatctttggttcctttaatcctcttcttgcttatgttatcgcacttgta
gtaacagcatactacaggggtgatgaaggtcgtcacttgaggcaagaagtagacaaatgg
tgcttgatcattgcttgcatgggtatagtgacagtcgttgccaatttcttgcaacacttc
tactttggtatcatgggggagaaaatgactgaacgagttcgcagaatgatgttttcagca
atgctccgcaatgaggtgggatggtttgatgaagaggaaaacagtgctgataccttgtcc
atgcgcttggcaaatgatgctacatttgtgcgagctgcttttagtaatcggctttcaata
ttcatacaggatagtgctgctatcattgtggctgttttgattgggatgttgctacaatgg
cgattagcacttgtggctttggcaaccctacctgttctcactatttctgccattgcacag
aaattatggcttgctggtttttcaagggggattcaggagatgcacaggaaagcatctttg
gttctcgaggatgcagttagaaacatttacactgtggtagcattctgtgctggtaacaag
gtaatggagctctacagattgcagctaaagaagatctttaagcagagtttctttcatgga
atggccatcgggtttgcatttggtttttcacagttccttctttttgcctgcaatgctctt
ctcctctggtacactgcatactctgtgaaacaggggtatatgaatctacctactgctctc
aaggagtatatggttttctcttttgcaacattcgcactggtagagcccttcgggttggct
ccttacatactcaaacgacgtaaatctctcatttcagtatttgaaatcatagatcgagtg
ccaaagattgagccagatgaaagctccgccatgaaaccacctaatgtttatggaagcctt
gagttgaaaaatgttgatttctgttatccaacccgcccggaactgttggtgctgagcaat
ttcagtctcaaagtaaacggggggcaaactgtagctgtggtgggagtttcagggtcgggt
aagagcactataatttctttgatcgagagattttatgatccagttgctggtcaagtgatg
ctggatggtcgagatctgaagctttataatttgagatggttgaggaaccaccttggtctt
gttcaacaggagcccattattttctcgacaacaataagggagaatataatatatgcaagg
cataatgctagtgaagctgaaatgaaagaggctgcaagaatagcgaatgctcatcatttc
atcagcagcttgcctcatggttatgatacacatgtggggatgagaggggttgatctaacc
ccaggacagaagcaaagaattgcaatcgctcgtgttgttttaaaaaatgctcccattttg
ttattggacgaagcaagttcgtctattgaatctgagtcaagtcgagtggtgcaggaggcc
cttgatacattaatcatggggaacaaaacaaccatcttgatagctcacagagctgcgatg
atgaggcatgttgacaacattgtagttcttaatggagggagaattgtggaagaagggtcc
catgattctttaatgtcaaagaacggtctgtatgtccgtttgatgcatcctcactttggc
aagggtctgcgtcagcaccgccttgtttag
DBGET
integrated database retrieval system
