Rosa chinensis (China rose): 112182673
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Entry
112182673 CDS
T06020
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112182673
Transcription machinery [BR:
rcn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
112182673
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-GeneID:
112182673
NCBI-ProteinID:
XP_024176960
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Position
1:65890329..65893491
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AA seq
519 aa
AA seq
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MGVVTVSSSVSRTPLGLSPKLASSQRSTLRKPLIVAFRTDKSNKNALVAPQEKVPLPIET
RKKVQKLGKARKLPESVKAALIEEAPTCNLELDYNEAAAKLENLYKRSPETEASDLENVD
GLMIKRSRKRRKKISEVDDKVEKRKSDDIVVGSRTKKAKRLSLDKRVALKWNKDEKVAAP
VVRKRKDRKSENQMIEELVREYSASTDLVSLDWKKMRIPPVLTSSEHTWLFKLMQPMKAL
LQVKETLQKDLGREPNKGELAEATSTSVVQVKKHLEVGRAARNKLIKHNLRLVLFVINKY
FQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRV
SFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHS
VTQEEFINAITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacagtttctagctcagtttctaggactccgttaggattgagcccaaaa
ttggcatcaagtcagagatcaacgttgagaaagccattgattgttgcctttagaacagat
aaatccaataagaacgcgttggttgcgcctcaggagaaagtacctttgccaatagaaaca
cgaaagaaggtccaaaaactagggaaggctcgaaagctccccgaaagtgtaaaagctgca
ttgatagaggaggctcctacttgtaatttggaactggattacaatgaagctgctgccaag
ctggaaaatctgtacaagcgcagccccgagactgaagcttcggatttggaaaatgtagat
ggattgatgatcaagagaagtcgcaaaaggaggaagaagatcagtgaagttgatgacaaa
gtagagaagagaaaaagcgatgacattgtggttgggagcaggacaaagaaggctaaaaga
ttgagtcttgataaaagggttgcgttgaaatggaataaggacgagaaagtggctgctcca
gtagttcgaaagagaaaagatagaaagagtgagaatcagatgattgaggagcttgtaagg
gagtattcggcttcaactgatctcgtcagtttagactggaaaaagatgaggattcctcca
gttcttacttcttctgagcatacttggttgttcaagctaatgcaacctatgaaggctctt
cttcaagtgaaagagaccctgcagaaagatttggggagagaaccaaataagggtgaacta
gctgaggcgacaagtacgagtgtggttcaagtgaaaaaacacttggaggttggtcgagct
gcaagaaacaaactcatcaagcataatctccggcttgtgttatttgtcattaacaaatac
tttcaagactttgctaatggtccaaaatttcaagacctttgtcaggcaggagtgaaggga
cttatcacggcaattgatcgctttgaaccacaaagaagattccggctttccacatatggt
cttttctggatcaggcatgccatcatacgttccatgacactatcaagctttactcgtgtc
tcctttggccttgagtctgttagggcggaaatccagaaagccaagcttgaaatgttggtt
cagcttaaaagaatgccaacagaggacgagataattgaaaaggttggaatttctcctgag
aggtatcatgaagtaatgagggcctcaaaacctgtcttctctcttcattcaaggcattcg
gtcacacaggaggaatttataaacgctattactgatgttgacggcgttgaaggtgataac
cggcggaaacctgctcttctcaggcttgctatcgatgatgtgcttgattccctgaagcca
aaagaaagcttggtgatcaggcagagatatggccttgatggcaagggtgacagaacattg
ggggagatagctggaaacttgaatatttcaagagaaatggttcgaaagcatgaagttaag
gccctcatgaagctcaagcatccagctcgagtagactatcttcgcagatacatagtctaa
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