KEGG   Rosa chinensis (China rose): 112182673
Entry
112182673         CDS       T06020                                 
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
  KO
K03093  RNA polymerase sigma-I factor
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112182673
Transcription machinery [BR:rcn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     112182673
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 Sigma70_r4_2 GerE
Other DBs
NCBI-GeneID: 112182673
NCBI-ProteinID: XP_024176960
LinkDB
Position
1:65890329..65893491
AA seq 519 aa
MGVVTVSSSVSRTPLGLSPKLASSQRSTLRKPLIVAFRTDKSNKNALVAPQEKVPLPIET
RKKVQKLGKARKLPESVKAALIEEAPTCNLELDYNEAAAKLENLYKRSPETEASDLENVD
GLMIKRSRKRRKKISEVDDKVEKRKSDDIVVGSRTKKAKRLSLDKRVALKWNKDEKVAAP
VVRKRKDRKSENQMIEELVREYSASTDLVSLDWKKMRIPPVLTSSEHTWLFKLMQPMKAL
LQVKETLQKDLGREPNKGELAEATSTSVVQVKKHLEVGRAARNKLIKHNLRLVLFVINKY
FQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRV
SFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHS
VTQEEFINAITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgggagttgtgacagtttctagctcagtttctaggactccgttaggattgagcccaaaa
ttggcatcaagtcagagatcaacgttgagaaagccattgattgttgcctttagaacagat
aaatccaataagaacgcgttggttgcgcctcaggagaaagtacctttgccaatagaaaca
cgaaagaaggtccaaaaactagggaaggctcgaaagctccccgaaagtgtaaaagctgca
ttgatagaggaggctcctacttgtaatttggaactggattacaatgaagctgctgccaag
ctggaaaatctgtacaagcgcagccccgagactgaagcttcggatttggaaaatgtagat
ggattgatgatcaagagaagtcgcaaaaggaggaagaagatcagtgaagttgatgacaaa
gtagagaagagaaaaagcgatgacattgtggttgggagcaggacaaagaaggctaaaaga
ttgagtcttgataaaagggttgcgttgaaatggaataaggacgagaaagtggctgctcca
gtagttcgaaagagaaaagatagaaagagtgagaatcagatgattgaggagcttgtaagg
gagtattcggcttcaactgatctcgtcagtttagactggaaaaagatgaggattcctcca
gttcttacttcttctgagcatacttggttgttcaagctaatgcaacctatgaaggctctt
cttcaagtgaaagagaccctgcagaaagatttggggagagaaccaaataagggtgaacta
gctgaggcgacaagtacgagtgtggttcaagtgaaaaaacacttggaggttggtcgagct
gcaagaaacaaactcatcaagcataatctccggcttgtgttatttgtcattaacaaatac
tttcaagactttgctaatggtccaaaatttcaagacctttgtcaggcaggagtgaaggga
cttatcacggcaattgatcgctttgaaccacaaagaagattccggctttccacatatggt
cttttctggatcaggcatgccatcatacgttccatgacactatcaagctttactcgtgtc
tcctttggccttgagtctgttagggcggaaatccagaaagccaagcttgaaatgttggtt
cagcttaaaagaatgccaacagaggacgagataattgaaaaggttggaatttctcctgag
aggtatcatgaagtaatgagggcctcaaaacctgtcttctctcttcattcaaggcattcg
gtcacacaggaggaatttataaacgctattactgatgttgacggcgttgaaggtgataac
cggcggaaacctgctcttctcaggcttgctatcgatgatgtgcttgattccctgaagcca
aaagaaagcttggtgatcaggcagagatatggccttgatggcaagggtgacagaacattg
ggggagatagctggaaacttgaatatttcaagagaaatggttcgaaagcatgaagttaag
gccctcatgaagctcaagcatccagctcgagtagactatcttcgcagatacatagtctaa

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