Rosa chinensis (China rose): 112182726
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Entry
112182726 CDS
T06020
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112182726
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112182726
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
112182726
NCBI-ProteinID:
XP_024177031
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All DBs
Position
1:65913981..65920447
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AA seq
441 aa
AA seq
DB search
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGQVVNTKCNVGANRNQAFI
EFAELNQAITMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGA
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALIQFSDAQIATDAKNSLDGRNIPSYL
LPDHLGPCSLRITYSGHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGNGQISVGLDGKKQE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNIPMVNSQPSILGQQPVNM
MSPAAPQYGGAQFAPTGQGMMPQPSAGWGPTVPAVPQSMPMQMPNQPYMPSGTVPSQMGP
GMMPGGAQQPNFPPYHNGHVQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtgtccagtcagccacagttccgctacactcaaccaccatccaaggtgctc
catttgaggaacttgccgtgggagtgtacagaggaggaattgattgagctgggaaagcca
tttggtcaagttgtgaacacaaagtgcaacgtcggagcaaaccgcaatcaggcttttatt
gaatttgcagagttaaatcaagctattacgatgatatcgtattatgcctcatcgtcagaa
cctgctcaagtaagggggaaaactgtctacctacagtactccaataggcaagaaatagtg
aacaacaaaactgctgcagatgttgccggaaatgtactcttggtaacaattgaaggtgca
gatgcacggcttgtcagtatagatgttttacacctggtattttcagcttttggatttgtg
cacaagataactacttttgagaagacagcaggattccaggcactgatccaattttcagat
gcacaaattgccactgatgcaaaaaattcactggatggaagaaacatccctagctatctg
ctccctgatcatctgggaccttgtagtctcaggataacatattctggacacacagatttg
agtgtgaaatttcagagtcaccgaagcagggactacactaatccttaccttcctgttgct
ccatcagccatagatggaaatggtcagataagtgtgggcttggatggtaaaaagcaagaa
cctgagagtaacgttcttcttgcatccatcgagaacatgcagtatgccgtcaccttggac
gttctgcacatggtcttctctgcttttgggcctgtccaaaagatcgccatgtttgataag
aacgggggagttcaggctttgattcagtatcccgatgttcagacagctgttgttgcgaag
gaagccttggaggggcattgtatttatgatggagggttttgcaagctccacatctcatat
tcacgtcatactgatctcagcataaaggtcaataatgataggagcagagactatacaatt
cctaacattccaatggtgaactcacaaccctcgattctggggcaacagccagttaacatg
atgagtccggctgctcctcaatacggtggtgctcagtttgctcctacaggtcaggggatg
atgcctcaaccttcagcagggtggggacctacagttcccgcggttcctcagtccatgcca
atgcagatgcctaatcaaccttacatgccatctggaacagtaccctcccaaatgggtcct
ggcatgatgccgggtggtgcgcagcagccgaattttcccccatatcacaatggtcatgtg
caatag
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