Rosa chinensis (China rose): 112182817
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Entry
112182817 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112182817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112182817
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112182817
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GFIT
Motif
Pfam:
cNMP_binding
IQ
DUF2532
Motif
Other DBs
NCBI-GeneID:
112182817
NCBI-ProteinID:
XP_040364342
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Position
1:65993122..65994076
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AA seq
287 aa
AA seq
DB search
MTATVAGKPAEGTLQQHRWQETRGVDEENLICNLPKDLRRDIKRHLCLALLMRVPMFEKM
DDQLLDAMCDRLKPVLYTEDSYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLK
AGDFCGEELLTWALDPHTSPNLPISTRTVQALSEVEAFALKADDLKFVASQFRRLHSKQL
RHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAETSSPSLGATI
YASRFAANVLRAVRLRRSGTRKGRVPERIPPMLLQKPAEPDFTAEEQ
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccgtcgccggaaaaccagctgaaggtactctccagcaacacagatggcaa
gaaaccagaggtgtagatgaagagaatttgatctgtaatcttccgaaggaccttagaagg
gacataaagcgccatctctgcttggctctactaatgagggtgccaatgtttgagaaaatg
gatgaccaattgttggatgcaatgtgtgaccgtctcaagccagtactgtatactgaagac
agctacattgttcgggagggagacccagtggatgaaatgctcttcataatgcgaggcaag
ctattgactatgaccacaaatggtggaaggactgggttcttcaattctgaatatctcaag
gccggtgatttctgtggtgaagagcttctcacatgggctcttgatcctcacacctctcct
aatcttcccatctcaactagaactgtccaagcccttagtgaagtcgaagcctttgctttg
aaagcagacgatctgaagtttgtagcctcccaatttcgacggcttcacagcaagcagctc
cgccacacattcaggttttactctcaacagtggaggacttgggcggcttgctttattcag
gcagcatggcgtcgttatagtaagaagaagcttgaagagtctctgcgggaagaggagaat
aggttgcaagatgcacttgcgaaggcagagacaagctcccctagtcttggtgccaccatt
tatgcctcgcgattcgctgctaatgtacttcgcgctgtacggctgcggcgcagtggtaca
cgcaagggaagggtgccagagagaataccgcccatgctacttcagaagccagcagagccg
gattttactgctgaagaacaatag
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